FMO02374.5prime Sequence
987 bp (987 high quality bases) assembled on 2008-05-14
> FMO02374.5prime
CAGTCGACATGGGGGACCAACAGCAGCTGATCCTGGCCACCGGTGGTTAT
GACCACACCATTAAGGTGTGGCAGGCGCACACGGGCAACTGCATTAAGAC
GATGAGATTCGTGGAGACCTCGCAAGTGAATGCGCTAGACAGGACACCGG
ATAAGACGCGACTGGCGGCGTGCGGATACCAGTGCATCCGGCTGTACGAC
CTGGAGTCCAACTGCACCGCACCGGTGATCAATTTCGATGGCGTGCAAAA
GAATGTGACGCGACTTGGCTTCCAAGAGGACGGCAATTGGATGTTCACCG
CCGGCGAGGATCATCACGTGCGGATCTGGGACATGATTGCCGCACCGCCA
CACTGTTCCCGGATCTTTGATTGTGAGGCGCCGGTAAATGCCGCCTGTTT
GCATCCCAACCAGGTGGAGATCGCCATGGGCTCACAAAATGGCAGCGTCT
TTCTGTGGGACGTCAAGTCGGAGCGGCACGAACGCATCGTGCCCGAGGTG
GACGCATCCATTCAGGATGTTGCCATCTCGCCGGATGGCAGATACTTGGC
GGCGGCCAATAACAAGGGCAACTGCTACATCTGGTCGCTGACCAGTCAGG
ATCAGAAGATGAGCACGCTGCGGCCGAACAGGAAAATTCCGGCCCACTCT
CGCTACATACTGCGCTGCAAATTCAGTCCCGATTCCAGGCTACTGCTGAC
GACATCCGGCGATGGCACTGTGTGCATTTGGAAGACGGATGACTTTAGCA
AATGGCGCGAGCTGTGCATCGAGAACTATTGGGTGTGGGATGCCGCCTTT
AGCGCCGATTCTAAATGGCTGTTCACAGCCTCATCCGACGGCATTGCACG
ACTGTGGAAGCTGCAGACAAAGAGTTCGATTAGGGATTATACTGGTCACA
CCAAGGCCATCACTGCCCTGTCCTTCAAGGACGAGATCGTGGCAAAGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCTCAGGT
FMO02374.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lst8-RA | 1760 | CG3004-RA | 95..1028 | 9..942 | 4670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9604886..9605706 | 942..122 | 4105 | 100 | Minus |
| X | 23542271 | X | 9605762..9605875 | 122..9 | 570 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G5A | 2841 | G5A G5A 2841bp | 2026..2075 | 24..73 | 124 | 72 | Plus |
FMO02374.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:18 Download gff for
FMO02374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3004-RA | 88..1034 | 1..952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:18 Download gff for
FMO02374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lst8-RA | 91..1037 | 1..952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:55 Download gff for
FMO02374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lst8-RA | 91..1037 | 1..952 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:55 Download gff for
FMO02374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9604877..9605705 | 123..952 | 99 | <- | Minus |
| X | 9605762..9605879 | 1..122 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:18 Download gff for
FMO02374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9498910..9499738 | 123..952 | 99 | <- | Minus |
| arm_X | 9499795..9499912 | 1..122 | 96 | | Minus |
