FMO02396.5prime Sequence
1209 bp (1001 high quality bases) assembled on 2008-05-14
> FMO02396.5prime
CAGTCGACATGCTTCTGACGCTTCGAGTGCAGGGAGCACGGCACTGGTTG
AAGTCCACCCGCTGCCTGGCCAGCAGTGCGGCGCCCGCGAAGTCGCCGTC
ATCGCCACCGCAGCTGGAGGTCAGTGGAAGCACGTACGCCACCGACGGAT
GGACGAACGTAACGCCCAAGATACTCTCCTACGTGGGGGCCAACAAGCAC
CTGCAGACGGACCACCCGCTTTCCATCATCCGCCAGAGGATCGTAAACTA
CTTTTATGGAGCGTATCGCAACCAAAGGGGCAATCCACTATTCTCCGTCT
ATGATCAAATGAATCCGGTGGTTACTGTGCAGCAGAACTTTGACAATCTG
CTAATTCCCGCCGATCATGTGAGTCGACAGAAATCCGATTGCTATTACAT
CAATCAGCAGCATCTGCTGCGCGCCCACACCACCGCCCATCAGGTGGAAT
TGATCTCGGGCGGGCTGGACAACTTTCTGGTCGTGGGCGAGGTGTATCGA
CGGGACGAAATCGATAGCACCCACTATCCGGTATTCCACCAGGCGGACGC
TGTGCGGCTGGTCACCAAAGACAAGCTTTTCGAGCGCAATCCTGGCCTGG
AACTCTTTGAAGAGACGTGGTCGGGTACGCTGGCCGACCCCAAGCTGATT
CTGCCCTCATCCAAGTTCATGGACCAAACCAAACAGCCCTGCCACACGCT
CGAGGCCGTCAAGTTGATGGAGCACGAGATGAAGCACGTGCTGGTTGGCC
TGACCAAGGATCTGTTTGGGCCGCGCATCAAGTACAGATGGGTGGACACC
TATTTTCTCTTCACCCAGCCCTCCTGGGAGCTGGAGATCTATTTCAAGGA
CAACTGGCTGGAGGTCTTAGCTGCGGCATCATGCGCCACGAATCCTGCAG
AGATCGGGCGTTCATCATCGATTGCTACGCCTTTGGCGTCGGCCTGAGCG
ACTGCCATGTGCTGTTCGATATACCTGACATCCGGCTCTTCTGGTCGAAC
GACATGCTTTCTGTCGCAGTTTAGCGAAAGATCTGCACATTCTGCCAGTC
CAAGCCCATTCTCCCCACTATCGCAATGCCGATGACTTGTCGTTCTGGCC
TGCCCAGGACTTGAGGTGATGCCGGCTTCTCTGCCGACGACTTTCCGATC
TATCGCTCTGTACCTGGTATTGTGTGGAACGAACTACGCTCGTTGTGGAG
CACAGTCTA
FMO02396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-phe-RA | 1526 | CG13348-RA | 102..1280 | 9..1168 | 5170 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13968409..13969457 | 9..1046 | 4720 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:28 has no hits.
FMO02396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:41 Download gff for
FMO02396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13348-RA | 63..1223 | 9..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:55 Download gff for
FMO02396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-phe-RA | 102..1262 | 9..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:54 Download gff for
FMO02396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-phe-RA | 102..1262 | 9..1152 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:54 Download gff for
FMO02396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13968409..13969569 | 9..1152 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:55 Download gff for
FMO02396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9855914..9857074 | 9..1152 | 97 | | Plus |
