FMO02412.5prime Sequence
455 bp (455 high quality bases) assembled on 2008-05-23
> FMO02412.5prime
CAGTCGACATGGTCATCAATCTGAATCCGTCCACCTCTTCGAACGCCAAT
GCCAGCGGTAGCAGCGTGGGTGGCGGCAGCGGTGGCGGCAGCGACGGTGG
CAACGGCGATGGAATGAGCAGCGCTGGGAGCCAGAGCGGCAACATCATTG
GCGGAAACGGAAGCGGAAGCGGAAACGGTAACGGTAACGGTGATGGTAAC
GGTAGTGGCAACACCGCCGGAAACGTCAGTAGCGGCACCCCCAGCAACCT
GATGGGCATCATCAGCCATGAGATGTTCGATGGTATCGTCTATCTGCATG
TGGTATGTGCCGGTGAGTCAAGCTCCAAGTGGGTCACTCTGGAGGAGGCG
ATGGCCTACTGTCCCAGCGGCGTTGTTGCCTACACCAAACTGCAGCTGGC
CGAGATTTATGGCATACCGATGGACGTTCTGTTCGACGCAAGCTTTCTAG
ACCAT
FMO02412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9106-RB | 1298 | CG9106-RB | 504..932 | 9..437 | 2145 | 100 | Plus |
| CG9106-RA | 1240 | CG9106-RA | 446..874 | 9..437 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15271402..15271830 | 437..9 | 2145 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:28:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 620..717 | 172..72 | 165 | 64.4 | Minus |
| TART-A | 13424 | TART-A 13424bp | 11098..11129 | 53..84 | 115 | 84.4 | Plus |
FMO02412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:24 Download gff for
FMO02412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9106-RB | 66..498 | 1..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:25 Download gff for
FMO02412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9106-RA | 442..874 | 1..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:38 Download gff for
FMO02412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9106-RA | 442..874 | 1..437 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:38 Download gff for
FMO02412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15271402..15271834 | 1..437 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:25 Download gff for
FMO02412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15165435..15165867 | 1..437 | 99 | | Minus |
