FMO02418.5prime Sequence
692 bp (692 high quality bases) assembled on 2008-05-23
> FMO02418.5prime
ATTATACCAAGTTATCAGTCGACATGATATCTTTCCTGCCGCTCTGCGCC
CATCCCAATCCCAAAAAGGTCCTGATCGTGGGCGGTGGCGATGGCGGCGT
TGCTCGCGAGGTGGTAAAGCATCCACTGGTCGAGGAAGTGCATCAGGTGG
AAATCGACGACCGTGTCGTCGAGCTGTCCAAGCAATATCTCCCAGCGATG
GCCTGTGGTTTCGCCAACGAGAAGTTGAAGCTTACCATTGGCGATGGATT
CGACTATATGAAGAAACACAAGAACGAATTTGATGTCATCATCACCGACA
GCTCGGATCCCATTGGTCCGGCAGTGAGCCTGTTTCAGGAAAGCTACTAC
GAGCTAATGAAACACGCGCTGAAGGATGACGGAATCGTGTGCTCCCAGGG
CGGTAGCTTCTGGCTGGACCTGGACTACATCAAGAAGACCATGTCCGGCT
GCAAGGAGCACTTTGCTAAGGTGGCCTATGCCGTCACCTCCGTTCCGTCC
TATCCCTGCGGCCACATTGGCTTCGTCATGGGCTCCCTGAACAAAAACCA
GGACTTCGCTACTCCCAAGCTTGGAAAGTCCGAAATCGATTCTATAGACC
TAAGGTACTACTCCTCCGAGGTTCACTCCGCCGCCTTTGCCTTGCCTCGA
TGGGTGCAGAAGCACTTTTACGAAGCAAGCTTTCTAGACCAT
FMO02418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SpdS-RC | 995 | CG8327-RC | 261..911 | 24..674 | 3255 | 100 | Plus |
| SpdS-RB | 1189 | CG8327-RB | 455..1105 | 24..674 | 3255 | 100 | Plus |
| SpdS-RA | 1511 | CG8327-RA | 291..941 | 24..674 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9632453..9633103 | 24..674 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:36 has no hits.
FMO02418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:45 Download gff for
FMO02418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8327-RB | 458..1127 | 13..682 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:45 Download gff for
FMO02418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SpdS-RA | 282..951 | 13..682 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:08 Download gff for
FMO02418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SpdS-RA | 282..951 | 13..682 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:08 Download gff for
FMO02418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9632444..9633113 | 13..682 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:45 Download gff for
FMO02418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5458166..5458835 | 13..682 | 98 | | Plus |
