FMO02427.5prime Sequence
1207 bp (998 high quality bases) assembled on 2008-05-23
> FMO02427.5prime
CAGTCGACATGATGGGCACACGGGCTGCGGAGCCCCGAGGATCCAGGAGG
TCCTTGGCAGGTCAAAGCATTCAAGAGCTCTCTGTGTGCCAGGAACCCGA
CCCGCTAAACACCTTTTTGGAGAAACCACTTACCCTGTATCAGTGGATGC
GGTGGCGCAACTGCAAGACCCATAAGCCGCACCTAGAGGAAACATACCCC
AGCATTCTACCGCCTATATCCAAATGTGACGATGCCAAGACTCTGAAGTA
CGTTGAAAATGCCATGGAGGCCAACAAATGTAAAGAATACGTCAAGGAAG
ACGTGCTGACCGTGTGGAACTACAGTCCCCAAAAGGAATCCTTGGTGTGG
TATGGCGTTAAATCGCAGTACCCGTCTCCACAGGCCGTCCTCTATGACCG
CGCTTTGAAAAAGAGCCTAAAGGCGGCTAGTCTTGCTCCAAAACCGCCGA
AGAAGTCCAACATAAAGCCTAAATGGCAACTTCAGAAGAAGCCCCCCCAG
CCTGGCGCTTTTGTTTTAAATCGAAAATGTCTGAAGGCCAAGCTCGAAAG
GATGCCAAACATAAAACGCCAACTGAAGTCGAACAATGTCTTCTCCTGGC
TTCACTGTCCTCAGCCAGCGGATCCGAGCAATCCTTTTGACGATAGCGCC
GTCTATCCAGCGATCAGCATAGAACAGGCGATGGACATGGCGAAGCCGGA
AAAGCCTCCCAAACATGGCCTCAGACGTAAGCATTGGTACTGCCCCCCGA
AATGCGGCGAGGCAGAGAGCAAGTGCACCGATTACGAGTGGGCAAAGTAC
AAGATGGATCCCCGGCCCGACAACGAGGCATTCCAACGCGAGATGGCGAA
CCAAAACGCCTTTAAACAACCGGAGCCCCGCAACTACGATGAACTGTACA
AATCGCTGGTAACTTGTTTCGTTCAAGACCCAAATGGAAAGAATGATCTC
TGCGAAGCGCTGGAGAAGTGCTGCAGGATCCCAAGATCCACTGCACAGGG
TGCACGAGTTCGTTCGATGCGCGGAGGAAAATGAAGTTTGTGTTGCTGCG
TAAATGCCTGCCTGCCTCAAGAGAAGGAGAAAATCTTGCAAGTAAAGCCA
TAGACACGAACGATGATGCATGTAATACGCGTAATGCTCTCCTCCAATCT
GCAATGATTCTTATGCCATCCAAGAAACGCGCTACCCAAGAGACGCGACA
TATAGAT
FMO02427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43755-RD | 1709 | CG43755-RD | 137..1239 | 9..1099 | 4995 | 97.8 | Plus |
| CG43755-RB | 2333 | CG43755-RB | 137..1148 | 9..1015 | 4920 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 328657..329625 | 977..9 | 4830 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-28 21:24:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 3547..3622 | 220..295 | 119 | 61.8 | Plus |
FMO02427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:54 Download gff for
FMO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31920-RB | 132..1213 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:17 Download gff for
FMO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 132..1213 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:36 Download gff for
FMO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 132..1213 | 1..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:36 Download gff for
FMO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 328618..329629 | 1..1011 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:17 Download gff for
FMO02427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 328618..329629 | 1..1011 | 99 | | Minus |
