FMO02432.5prime Sequence
1200 bp (1010 high quality bases) assembled on 2008-05-23
> FMO02432.5prime
CAGTCGACATGCAGGTTGATGGTTGTACCAGCAGCTCATCCGAGATCCCC
CATCCCGCGAAGCGTGAAACGTGGATCAGTGGGAAAATGCAGTCGTCATC
GCATTCCAAAGATGGTCATAATGCAGCGGGGGCTTCAAAACTGCTTCAGG
ATCACCAGGAGCCCGAGGACTACTTGGAGCACCTAATGAAGGAGGGCAGT
CAGGAGGGCGACAGCGGTGCTGATTTGGAGCTACCTTCGTGGTACGATGA
GCAGCTATTCAGGCGTGGTCAGAGCTACTTTAGCACGTATCGCTTTGTAA
TGAACGCCGGAATGCTGGCTGGTCTTATTGCCGTGCTGGCTATTCCATCC
ATTCTCCGGGTGCTGTCGTGCACACGCCAATCCTCGACAGCGTTCACCGC
CTACCGTCGCTATGTGCGTACTATATTCCACACGCAAGCCTGGTATAACC
ACAACATCGCGGACCGTGGCAGCAGGTTCTGGACCAGCATTGCGGCCGTG
AGGCGGGCCCACAGCCGCTCCAGTCATGCGTGCGCCCGCCAAGGAGCTGG
ACAGATCACCCAGAAGGATTTGGCGCTCACGCAGTTCGGTTTCATTGGCT
TCATAACGATGGGCGCACATCGCATAAAGCTGAAAGATCAGGACTTCCTG
GAGGCCACTACGCATATGTGGCGCGTTCTCGGCTATCTGCTGGGCATCAA
GGATGAGTACAACATCTGCGGTAGGAACTGGGCGGAGTCAAAGCTCCGCC
TGGACATTGTGATGCGTAAGTATACGAACCAGCTCTGGCAAACACTGGGG
AGGATTTCAAACGAATGACCGAGGCCCTGATTAATGGCTTGTGGCACATA
AACACCATGCTGTCGGTGAATGCCAACATATTCTTTGCCAAGCGATTGGC
CTGCGTTAAGGATACGAGTACTACAGTTTCGATCATGAGACGGAGTGCGC
AGATCCCAGCAGAAGCTGCACTACTACGACATGGGATGGTGGGACCGATT
CATAGTCAGCTACGCTGTCTCGTCACATATCTGCACAGTATGCCCTGGTG
CAATGTACTTGACTTCGCGTCTGGCTGGGTGACATATCACTATACTGCCT
ACGTCCCCATTTGAACTGACGATCCCGGAATTGCGAATCCGAATGCGGAC
TAGATCCTTTGCTTGACCTGAGACATGTCACTTCCTGAACCATCTCTTTG
FMO02432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31344-RA | 1450 | CG31344-RA | 180..1307 | 5..1113 | 5125 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15223587..15224388 | 1055..265 | 3520 | 98.3 | Minus |
| 3R | 32079331 | 3R | 15224742..15224934 | 265..73 | 965 | 100 | Minus |
| 3R | 32079331 | 3R | 15225082..15225150 | 73..5 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:18:04 has no hits.
FMO02432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:00 Download gff for
FMO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 269..1381 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:44 Download gff for
FMO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 176..1288 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:56 Download gff for
FMO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31344-RA | 176..1288 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:56 Download gff for
FMO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15223540..15224387 | 266..1096 | 97 | <- | Minus |
| 3R | 15224742..15224934 | 73..265 | 100 | <- | Minus |
| 3R | 15225083..15225151 | 1..72 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:44 Download gff for
FMO02432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11050464..11050656 | 73..265 | 100 | <- | Minus |
| arm_3R | 11050805..11050873 | 1..72 | 95 | | Minus |
| arm_3R | 11049262..11050109 | 266..1096 | 97 | <- | Minus |
