FMO02433.5prime Sequence
1196 bp (1040 high quality bases) assembled on 2008-05-23
> FMO02433.5prime
CAGTCGACATGTCGTATCAGATCAAATCGACGCCCTACTTTCGTCGCATG
TTCAACGAGAGCAAGAAGAATGGCCAACTGCAGCGTCTGCGTGATGAGTA
CGAGCGCATCCAGGAGTTCAACGATCGCACCATCGAAATGAAGATGCGAC
AGGTGCGATTAAAGCGGCTATTTCGCGAGATCGAGGTAATTAAGGTGGCT
GGCGGGGCGGCCGGTGGCGCCAGCGGTGGCGGCACATCGACGGCATCATC
GCCATCGAATGTTGACCAATCGTTTGGTTTAGCCGGCGGACGCGTTACCC
GCCGGAGACGGCAACAGGCACACGGTGCTATCACGCTGGCTAGCAGCACG
CCCCAGCAGCGGATGCACAAACAGCGCATAGAGACGCTGGCACGCGCACG
CCAACTGGGCCAGGAGATCTCGCGTCGGAATGGCCTAATGGCCGAGGCCG
GCACCGGCGGTTTCCTGCGCAGCGAACTCCGGATGACGGCCAAGCTGCAG
GCGGCGAACGATGCACGCCGGGCGGCCGTGGAGCGTCGCGACTTGGCCGC
CAAGCGCATCTCCTATGGCAACGATCAGTCGCGACAGAATATCCAACGCA
TGCTCATCCAACGCCAGCGCAGACATGAACAGCAGCAAGCGTTGGCGGCG
ACAGTAGCATCACCGGCGGCACCGTCATCCAATTCCTACCAGGTGTCCAT
AGCGCAGCAGCCGGTCACAAGCAGGCCCAGGCATGAATACACGGACAATT
GCCAACAACAGCAGGAACTGCTGGCGGTGACCAGTGAGCGATCGACGGAG
CAGGCGATCATTTGCAGATGGAATGCGAGGGGCAGTCGTACTCGGAGCAA
AGCTTCCATTCGAACGACTGTCTGGCGCATCGATGGACGAGGATCTGGAT
GGTGAGGAGGAGCTGGATACACACGCCATCGCGTGATGCGACGCGGATGA
GAGCCGGAGCGGCAGTCCTGCCTGTGACGCTGAACAGAAAGATCACATTG
CAGCACATCACGCTGATATGCGTCGAGTCAAGCTCATGATCGTATCGAAA
GAACGCACTATCTCCGCTGCACGCAGCATGGTCGGTGTTGGTGGCCCATC
GTCCACATGGATCGCATCAGCAATGGAACGTCCGCCGCTAACAGATGACT
GGCACTGATTCCCATTCAATTCAGATAAGTGCAGGAGACCTCATGT
FMO02433.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4198-RA | 1867 | CG4198-RA | 175..1333 | 8..1130 | 4920 | 96.7 | Plus |
| CG4198-RB | 1864 | CG4198-RB | 175..1330 | 8..1130 | 4865 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5313432..5314145 | 8..721 | 3570 | 100 | Plus |
| X | 23542271 | X | 5314210..5314483 | 720..986 | 1020 | 97.4 | Plus |
Blast to na_te.dros performed 2014-11-28 22:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baggins | 5453 | baggins BAGGINS 5453bp | 1588..1652 | 888..958 | 125 | 69 | Plus |
FMO02433.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:01 Download gff for
FMO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4198-RA | 159..1255 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:08 Download gff for
FMO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4198-RA | 167..1263 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:25 Download gff for
FMO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4198-RA | 167..1263 | 1..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:25 Download gff for
FMO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5313424..5314145 | 1..721 | 99 | -> | Plus |
| X | 5314212..5314586 | 722..1081 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:08 Download gff for
FMO02433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5207457..5208178 | 1..721 | 99 | -> | Plus |
| arm_X | 5208245..5208619 | 722..1081 | 93 | | Plus |
