FMO02434.5prime Sequence
1195 bp (1032 high quality bases) assembled on 2008-05-23
> FMO02434.5prime
CAGTCGACATGAAGTGCCAACTGCTTTTCGTGGCCACCGTGTGCCTGGCC
AGCGTTTGGGCGCTTCCCGTGCCCGACGAGGAGGTGGCCATCCAGCCGGA
CAGCGGTGCCAAGGCCGAGCTCCTGACCAAGACCGTGCTGCCCACCGCCG
TTGAGCCTGCTCCCTTGAAGCCCGAGGCCGAGAAGCCGGCAGAGACCAAG
ACCATCGAAGCCAAGGCCGCCGTTCCAGAGCAGCCCGACGTCAACGCCAA
CCCATCACCCAGCACTCCTGCCGCCGAGCCAGCCAAGGAGATCAACAGCG
TGGAGCTCAAGTCGAGCGCGCCGGACGTAGAGACCGCTCCGGCCATTCCT
GAGAAGAAGACCCTGCCCGAGGAGGCCAAGCCCGCCCAGGAGAACGCTCC
CGTTGAGGCCGAGAAGAAGCAGGAGAAGACCGCCCGCACGGAGGCGGAAC
CCACTGTCGAGGCTCAGCCCCAGGCCACCAAGGCCATTGAACAGGCCCCC
GAAGCCCCAGCCGCCAATGCCGAGGTGCAGAAGCAAGTTGTCGACGAGGT
CAAGCCCCAGGAGCCCAAGATCGATGCCAAGTCCGCCGAGGAGCCAGCGA
TTCCCGCCGTAGTGGCCGCCGAGAAAGAGACACCCGTGCCCGAGCAGCCC
GCCCGCCAGGAGAGGATCAACGAAATCGAACAGAAGGATGCCAAGAAGGA
CGCTGCTGTTGCCGAGGAGCCAGCCAAGGCCGCTGAAGCCACACCCACCG
CCGCTCCTGAAGCCGCCACCAAGTCGGACTCCAACATCCAGGTGATTGCT
CCCGAGAAGAAGTCCATCGAGTCGTCCCCTGCTGCTGCGGCTGCTTCTCC
TGCCGCCCAGGCTGCCCAGGCCAAGTCCGGTGAGGCCCCCAAGCCAGTTG
ACCAGCAGAGAGCACCGAAACCGTTGCCGAATCCGCTCCCGTCCTAAAGA
CCAATGCCCCACTTGCTCCGGCCGGTGCCACCAGTGACGAGCCGTCAGGA
GCAGAGAGACAGCCAGCCGCTGATACCGCTGCCAAGGCCCTGCAGACCAA
AAAGACGGAGGAACGCACCACAGCTGGAGCCACAAAGCCAACCGCCCGCG
TTGCCTGCTCCGGCCCGAAGCCAAAGATCGCCGACCACCTGCCGAACCTG
TCAGGGCAGAGAGAGGCCATGCCACAGGCCCTATGCCCCTCATGT
FMO02434.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bnb-RD | 1853 | CG7088-RD | 80..1227 | 9..1134 | 5095 | 97.3 | Plus |
| bnb-RA | 2095 | CG7088-RA | 322..1469 | 9..1134 | 5095 | 97.3 | Plus |
| bnb-RC | 1947 | CG7088-RC | 174..1321 | 9..1134 | 5095 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18795249..18796293 | 1043..9 | 4855 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:50 has no hits.
FMO02434.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:49 Download gff for
FMO02434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7088-RA | 318..1388 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:52 Download gff for
FMO02434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnb-RC | 167..1240 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:38 Download gff for
FMO02434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnb-RC | 167..1240 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:38 Download gff for
FMO02434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18795227..18796297 | 1..1062 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:52 Download gff for
FMO02434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18689260..18690330 | 1..1062 | 98 | | Minus |
