FMO02435.5prime Sequence
1174 bp (1026 high quality bases) assembled on 2008-05-23
> FMO02435.5prime
CAGTCGACATGAGCTCCTGGAAGGACAGTCTCACGAGCATTCCGGGCACG
GTGGCGCAGTTGATTAACGAGAGCGCCAGCAACCTGTTACACGCCTCATC
CACGCTGGGATCAACAGTTGGCCTTGGAGGCTCTGGCTCCACTGGATCTG
GATCCGAGGCCGGAGGCTCCGAGGAAAGTGGTCCACAAGGTGCGGAGTAC
AGGGCGTTGCCCATTCCCGCGTCCTTGGTGCGCGAGCAATGGCGCCTAAT
CTTCACCAGCGATGCCAATATCCAGGATTTGCAGGCGGCCATCGCCCATT
GCAGAGATCTCGTCCTGCTGAGCGAGGAACTCAGCGAGGAGCGTCGCTGG
TTGGTGCGGCACCTGGTAGATTTGCGATACTCACTGCAGGAGCTGGAGGA
GGCCCAGGAGCAGCATTCCCTATCGTCGGACATGGTAGTTATGAATGCCA
TACGTGCTGTGGTGGGTCATCATTTTGTGCCCCATCACCCGCATCATGGC
AAACGGAATCGTCTGCAGGCAGCCGCCAAGAGGAACTACTGTGACCACTG
CACCACCATTATTTGGAGTGTGGTGCAGAACTCGTACGTGTGCAGCGATT
GCGGATTCCTGGTCCATCAGAAGTGCATCGATGGCGTGAAGAGGGTTTGT
GCCCATGTCCTGGTTTCAGAGCGGCAGCATCCCATTTCGGAGATATGTCC
AGAAATCGGACTCGCCTCCCAGGGATACAAGTGCGCCGAGTGCGGGACGA
TGCTAAATATAAAAAATACCTGGATTGAGCCGCGTCTATGCGACTATAGT
GGATTGTACTACTGCCCTCGCTGCAACTGGAACGACAGTAACTTTATACC
AGCCCGCATTATCCACAATTGGGACTTTTCGCCACGCAGAGTGTCGCGCA
CGGCGCTCCAAGAGATTAGTTGTTCCTAAATAACCGCTCATTCGCTTGAG
GAGACATCCCAAGCTGTTTGTGTTCGTAGAAAAATGTGTGCGGTAAAGAA
CTTCGCAATCTGTGCATATGCGCCACTATCTGCTGCTGCAGATGCAGCGG
TTGAGCTGGTGAATCAGCACTGGGGTCCGGCAAATCTGCAGTCATGATTC
ATTCTTATAATTCAGCCAGTGACTGAGCGTGACGATTCGCAGGAATTCAG
CATCAGGATCCAATCGATCTGGCC
FMO02435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-RA | 1637 | CG11534-RA | 78..1170 | 9..1081 | 4970 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12132223..12132976 | 9..762 | 3770 | 100 | Plus |
| 3L | 28110227 | 3L | 12133029..12133309 | 763..1032 | 930 | 95.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:57 has no hits.
FMO02435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:18 Download gff for
FMO02435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 52..1108 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:43 Download gff for
FMO02435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..1134 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:53 Download gff for
FMO02435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..1134 | 9..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:53 Download gff for
FMO02435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12132223..12132976 | 9..762 | 100 | -> | Plus |
| 3L | 12133029..12133328 | 763..1047 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:43 Download gff for
FMO02435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12125323..12126076 | 9..762 | 100 | -> | Plus |
| arm_3L | 12126129..12126428 | 763..1047 | 94 | -> | Plus |
