FMO02455.5prime Sequence
1218 bp (1040 high quality bases) assembled on 2008-05-23
> FMO02455.5prime
CAGTCGACATGTCTAGTGCCAGGCTACTCGAGTCGCAGACATCCGACGAG
GATAACGAGGACATCGAGCGGCGGCCTCACCAGAGCCATTCACGCAGCTG
CAGCAACAACACCACCCCCACCCATCCACCACATCCCATGGTCAGGAAGG
GGGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGGCACTGTTCCTGCTC
CTCGTCGCCCTCTGCTACCTCACCCTCAGCGGGGACACTCGCCTCGGTGG
CTCCGAGGATTCGGAGGAGGGATCTCACCATGGATTAGATAGTATGAATT
TCCGGCCATTGAACGAAACCGTTCACATATGCAGCGAGAGTTACGAGGAT
CGACGGCAGTTCATGCAGGATAAGCCCCAATCTGATTACGTCCAGTTGCC
CGTGATATACTTTGTTACTCCAACGTATCCGCGGCGCGAGCAAATCCCAG
AACTAACCCGTCTGGCGCACACGCTGCTCCATATTCCACGATTGCACTGG
CTGGTGGCCGATGATCAAGAGAAATGCAATGACTATATGGACACGCTGCT
CTATCGATTTGGTATGCCCTTTACCCACATGGTCAGCCCGATGCCCAGCA
AATTCCGGAATGAAAAGCCAGCGCCGCGAGGTGTGGCAAATCGGAGGGCA
GCCTTGCAGTGGATACGGCAGCATAATCTCACCAACGGAATACTTTACTT
CGGAGACGACGACAACACCTATGATCTGCGTTTGTTCTCTGAAATCCGGA
AAACGCAACGGGTTTCCATGTTTCCTGTAGTCTTATTGCTGATTATGGGG
TCAGCGGGCCAGTTGTGCGCAAAGGCAAGTTGTAGCATTCCTGGACTCCT
GGGTTGCCGGTCGACGCTGGCCCGTTGACATGGCCGGTTTGCAGTGAATT
TGGAGTACATGGCGCAGTATCCCTATGTGAATATGCCGTACAGCCCGGCT
ACGAGAGATCTCTTTCTGCGCAGCATGGCCTTCAATGAATCTGATGAGCC
GCGCGCATAACTGCACCGAAATTCTGGTTGGCACACGCAGACAGTCAAGA
GCCTCGGAATGGTCGATAGAAAGCAATAACTGGACGATCGTTCTACTGGG
CGCCTCTGCTTCTAATTCTAACCTATGGGCGTGACAGTTCACGGAAGTCA
GGAGCCATGGACGTATCGGAATGGGAGGCAAATCCACATCCAAAATTCTT
ATGCGCAGACGCTTTCTC
FMO02455.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-RB | 2406 | CG3881-RB | 495..1719 | 9..1201 | 5080 | 95.9 | Plus |
| GlcAT-S-RA | 1677 | CG3881-RA | 44..990 | 287..1201 | 3690 | 94.7 | Plus |
| GlcAT-S-RC | 2116 | CG3881-RC | 1006..1950 | 289..1201 | 3680 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9617330..9617609 | 9..288 | 1400 | 100 | Plus |
| 2L | 23513712 | 2L | 9621143..9621420 | 287..564 | 1390 | 100 | Plus |
| 2L | 23513712 | 2L | 9621478..9621742 | 561..824 | 1275 | 99.6 | Plus |
| 2L | 23513712 | 2L | 9621963..9622187 | 829..1043 | 665 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:24:32 has no hits.
FMO02455.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:24 Download gff for
FMO02455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3881-RB | 467..1602 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:30 Download gff for
FMO02455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 489..1624 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:48 Download gff for
FMO02455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 489..1624 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:48 Download gff for
FMO02455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9617324..9617609 | 1..288 | 98 | -> | Plus |
| 2L | 9621145..9621417 | 289..561 | 100 | -> | Plus |
| 2L | 9621479..9621741 | 562..823 | 99 | -> | Plus |
| 2L | 9621957..9622245 | 824..1095 | 92 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:30 Download gff for
FMO02455.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9617324..9617609 | 1..288 | 98 | -> | Plus |
| arm_2L | 9621145..9621417 | 289..561 | 100 | -> | Plus |
| arm_2L | 9621479..9621741 | 562..823 | 99 | -> | Plus |
| arm_2L | 9621957..9622245 | 824..1095 | 92 | == | Plus |
