FMO02459.5prime Sequence
1196 bp (1047 high quality bases) assembled on 2008-05-23
> FMO02459.5prime
CAGTCGACATGAATAACCGTGGAGTTGGATTCTCGGAGTTTTTCGTAAAA
ACCCCAACCAGTCGGTCCATTCAATTGCGTGCCAAAAAAGTGGCAAAGGA
ACTGGTGATGCAAAATAAGGATGTGCGGGACAAGATATTGAAAAACAAAG
TGCTTACCTATGCACAATTCCGAAAGATAATGAAATCAGCTGGCAATGTG
ACGGATCTGAATCCGATCACCTATAAAAGTATGATTGAAATACGACAATC
GCAGATCGATCACAGACGTCTCAAGAGTATTAAATCTGCTGGGGATTCGC
TTGGATTTCATGCTCGCCTTCTCAATCGCAGCCAGTTAGCCGGCGAATTT
AACCAAAAGCAGGAGATTTTCCGAAAAAATATGGAACTCCTTGGACGGAT
TAACAAGACCAATCGACTAAAGGGGGGTGTGGATAGCTTCAATCGCCATT
TTCCCGCCCTTCAGTCGAATCGGAATAAAATCCGTGAGCTGGCAGATCGC
TTGAGCCAGGAGAACAGGCAGCTCGGTTGTCGCCTATCGCAAGTGAAATC
CAAAGTGGATTCACACAATCCTTGGGTGCCACCCGTCAAGCCACTCGAAC
AAAAGGCCTCCGATGAGACGGTCAGTACTTTCTTGCCATATATGCCATCG
CCTCGCTTGGGCAAACGTAGTGCCCAAATCCTGCTGCGACCCATCATATA
TTTCGATATGGCGGTGCGAGAGAATAACCAGTTCATGGGCAGATTACTCC
TACAACTCTACACGGAACTGAGTCCGGAAGTGGTGCTGGAGTTTGTGCGT
ATGGCCACCCACAACGATGTAGGATGCCATCGGTTTGTGCGAATATTCTC
CAATCTCTGGATGGAGGCTGAACTTGTACCGGCTGTTCATGATTCCCTGC
ACAATCACACAGCGTCAAGTACTCCTTTTTGGATCCCAGCAGATACCGGC
GTATTATCATACCCATGGGACTATCGCGTCACTTTCCCCAGACTTCTCAG
CTATACCATCAGCTTTAGCATCGTGATTCCGTGCCAGCGGGTCATCTTTG
ACGAGTTGCGGCGCCTAAGGTGCTCCTAATTGCACGATCGACCAAAATGC
AGAACAAAAAACCTGATTGTAGCGGTGTGCTGCTTCCAGCTTCGACATTG
TGGGCCGAGTCCAGGTATGCATCTAGTCATTCTATCTATCCACTGC
FMO02459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32236-RA | 1463 | CG32236-RA | 150..1230 | 9..1076 | 5075 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4666190..4667240 | 1050..9 | 4830 | 98.9 | Minus |
Blast to na_te.dros performed 2014-11-28 22:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rooA | 7621 | rooA ROOA_LTR 7621bp | 3293..3329 | 481..517 | 113 | 78.4 | Plus |
FMO02459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:15 Download gff for
FMO02459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..1243 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:49 Download gff for
FMO02459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..1243 | 1..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:33 Download gff for
FMO02459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32236-RA | 146..1243 | 1..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:33 Download gff for
FMO02459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4666141..4667244 | 1..1093 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:49 Download gff for
FMO02459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4666141..4667244 | 1..1093 | 97 | | Minus |
