FMO02460.5prime Sequence
1152 bp (1022 high quality bases) assembled on 2008-05-23
> FMO02460.5prime
CAGTCGACATGGAAGCTGATGGACTGACCAACGAACAGACGGAGAAGGTC
CTCCAGTTCCAGGATCTCACCGGCATCGAGGATATGAACGTCTGCCGCGA
CGTCCTAATCAGACACCAATGGGATCTCGAGGTGGCCTTCCAGGAGCAGC
TAAATATCCGCGAGGGGCGTCCGACCATGTTCGCCGCCTCTACAGATGTC
CGAGCGCCCGCTGTCCTTAACGATCGCTTCCTGCAGCAGGTGTTTTCCGC
CAACATGCCTGGCGGAAGGACGGTTAGCCGGGTGCCCAGTGGCCCCGTTC
CCCGCAGCTTCACCGGCATCATTGGATATGTGATTAACTTCGTGTTTCAG
TACTTCTACTCCACGCTGACGAGCATCGTCAGTGCGTTTGTGAACCTGGG
CGGAGGAAACGAAGCCCGCTTGGTGACAGATCCACTGGGGGATGTGATGA
AGTTTATTAGGGAATACTACGAAAGGTATCCCGAGCACCCGGTCTTCTAT
CAGGGCACATATGCCCAGGCCCTTAACGATGCTAAGCAGGAGCTGCGTTT
TCTAATCGTTTACCTGCACAAGGATCCCGCCAAGAACCCAGATGTGGAAT
CCTTCTGCCGCAACACACTGTCGGCGAGATCGGTCATTGACTACATTAAC
ACACACACCCTGTTATGGGGATGCGACGTAGCCACGCCGGAGGGCTACCG
GGTGATGCAGTCGATAACGGTGCGCAGCTACCCAACGATGGTGATGATCA
GCCTTCGAGCAAATCGCATGATGATCGTCGGACGTTTCGAGGGGGATTGC
ACGCCCGAAGAGCTGCTCCGTCGCCTCCAGTCGGTGACGAACGCCAACGA
GGTGTGGCTGAGTCAAGCGCGTGCAGATCGCTTAGAGCGGATTTTACACA
GACTTTAAGAGACAGCAGGACGAGGCATACGAGCAGAGTTTGCTTGCGAC
GAGGAGAAGAGCGTCAGCGGCAAAGGAGCGGGATGCCGTCGGGCAGGCGG
AGAGGCTGGTGGAACAGCTCGACGCGATGTCAGCTCGCAGGAGGAGATTG
CCCGGCAAGATCGAGCTGGCCACATTGGTGCCATCGAGCGGCAGCGAATG
CCTGTCGCGCATTGCAGTTGTATCAGCGTGCAGGTGAAACACGCCCTAGA
AG
FMO02460.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Faf-RB | 2279 | CG10372-RB | 362..1490 | 9..1123 | 5185 | 98.2 | Plus |
| Faf-RA | 1978 | CG10372-RA | 451..1579 | 9..1123 | 5185 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18706897..18707863 | 1085..130 | 4230 | 98.2 | Minus |
| 2L | 23513712 | 2L | 18708114..18708238 | 133..9 | 625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:17 has no hits.
FMO02460.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:16 Download gff for
FMO02460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10372-RA | 443..1588 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:03 Download gff for
FMO02460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Faf-RA | 443..1588 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:55 Download gff for
FMO02460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Faf-RA | 443..1588 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:55 Download gff for
FMO02460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18706847..18707861 | 132..1131 | 97 | <- | Minus |
| 2L | 18708116..18708246 | 1..131 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:03 Download gff for
FMO02460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18706847..18707861 | 132..1131 | 97 | <- | Minus |
| arm_2L | 18708116..18708246 | 1..131 | 96 | | Minus |
