FMO02461.5prime Sequence
1152 bp (973 high quality bases) assembled on 2008-05-23
> FMO02461.5prime
CAGTCGACATGTTGCCAAATTTCGAAGTTATTGCACCGAATTGCACAATG
ATTGGGATGGCTGACAGCGCGGAGGGGGTTACCCAGGAAGACAGCCACAC
GGAGTCGAGGGCAGACGGCATCAGCGGGTCCTTGCGCTCCCTGGGCACAT
ATACCCAGGAGTCCACAGAGCCGGCTTTGAGTCCGGCGGACCTTCCCGCC
CGCAGCCGGAAGGCCTTTCTGCGGCACATGATCGGCCAGCTGGCGGAGCC
CGTGCAGAACCGCATACGGGCACTGCGGCACAATCAGCTGCAACAGGTAC
GCATTTCGGAGCAGTTCTTCCGGGAAGTCTACGAGCTGGAGCGACGTTTC
TACGGCCAGAGCTGCGCGCTCTTCGATGCGAGGCGGGATATTTTGGAGGG
TTCGGTGGAGCCACCGATCCAAACGGAGAAGACCTGGCCCGAGGACCCGC
AGGATGCTCTGTACCTGGACTTCGGGAACACCTACGGAGCTGCGACAGCT
GAGGCAAAAACTGGCTCCGGTTTCGCCGACTACGCTGGGTGTTCCACGCT
TTTGGCTGACAGTTTTCCAGAACGTGCCCCTGCTCTCGGAGTTGGTCCAG
GATCACGACGAGCCGCTTCTGGAGAGCCTAATGGATGTGCGCCTGGCTTA
CGACCAGGACAGCTACATGGTCATCTTTCAGTTTCGGCCCAATAGCTTCC
TGCACGATTCCTCGCTGCTGCTCACGAAGCGCTACTTTCTGCAGCACTCG
GCGGACCCGGAGTATCCCTTTCTGTTCGAAAGGGCCCGAAATAGTTCGTT
GCGAAGGCTGCCACATCCACTGGCGCGATGGCTCCAATCTCACTCTCAAA
CGGTGGAAAGCAGCGAAGAACAGAGCACACCGAGTCACCATGTCATGCCC
TCGGGAGTCTTCTTTCGCTTCTTTGCTCCGCCGCAGCCTTGACCTGTCGC
TCGCGATGAAAGACCAAGCTGATCCTTGCCACGATTCGAGTGGGCTCTGC
TACGCACCAATCGTCCCGAAGGCGTGCCTCTTTACCGGCGACTAGTTGAC
GCCTGAACGCGGCCTCTCTCGGACAGTCGCTCTGTCCTCGAGCGACATGA
ACAGGTCTGCAAGCTTCAGACCATTCGTTTGGGCCGGGCCAGTAATGGCC
TA
FMO02461.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3708-RB | 1301 | CG3708-RB | 76..1176 | 9..1090 | 4765 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 929048..930023 | 978..9 | 4260 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:42 has no hits.
FMO02461.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:30 Download gff for
FMO02461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-RA | 826..1931 | 1..1090 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:24 Download gff for
FMO02461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-RB | 71..1176 | 1..1090 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:22 Download gff for
FMO02461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-RB | 71..1176 | 1..1090 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:22 Download gff for
FMO02461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 928923..930028 | 1..1090 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:24 Download gff for
FMO02461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 822956..824061 | 1..1090 | 96 | | Minus |
