FMO02468.5prime Sequence
1193 bp (1052 high quality bases) assembled on 2008-05-23
> FMO02468.5prime
CAGTCGACATGTTTCCTGATGACTTCGACGTAGAACCCTTCAATCCATTC
AATGTGGGACCACCCAATAGTGGAGCCCGATCTGAATTCAAAATACCTAC
ATGCGTTACGTATCCGCCACCGGTATTCGTACCCAAGTCCGAATATGTAC
AACCATCAGAGGAGTTGGTTTCCCGGAAGAGCAACCAAAGTATAGGCAAG
TCGACTATCGGCGAGGTGGACATTTCCAAGGCCATCAATGAAGAGATGGC
CGTGGCCAAGAAGCAGGCCGAAGTTCTCAATGAAAAAGATCGCATTGATG
CGGGTGGTGTTTCAACAACGAAGCTGTCCAAGGTATCTCAATCAAAGGAA
GCGGTTTCAAAGGACTCTTTGCGCACCCTAATGCCAATAAGGTCAAACCG
TCAGGTCAGTGGTGATGGTAGAGCAAATTCCAAATTATCCATATCACAAT
TCAGTGCGGCATCCAAGACGAGCTGCACAAATAAGCAAAGTGAGGGTGAC
GTGGCCTCAAAGTCTTCGAACATAACATTGAAACGATCTGCAATAGGCAA
CAGTATTTCCTCAAATACCACCCTCACTCCGAAGTCAATTTTGAAGTCGA
AACATTTCTCAGAAGCAGCCAAAGCTTCCTCTACCACAATGAAATCAAAA
GTTTCAAATAAGCCATCAGAAACTGGAACGCAGCGCTCCTTCAAATTAAA
TCCTGCTGACTCAGACTCGAAACAATCTCTAAAATCTGCAAAACCAAAGC
ATTCCGATTTTAAAATGCAAGATAAGAAGCTGACCAGTTCTCAAGAACAA
GCCCCGTCTGTTGTTGCCACAAGTAATGCAAGGCAAGACTCTTGGAATGA
TCGTGTCCCTTCAAAGACCAACAAGTCAAATGTACTACCTGAATCCAAGG
ATGGGCCCAGCTATATTCATTCGGAAGCAGCTTTATCCTACAGACAGTCC
TTGACAGCAGCTGCGGAATGCGGATCGCCTAACGCCGGAATGAAACTTAG
CGTACACTCGTGCACGGATCACTCGATCAAGTACTCAAACTACGATGGGG
ATCGTATGACATTGTCAGCGAATGCTGTACTTCGCAGCTTCCTAGAACAT
CGTGGGCGCGCGGCCAGGTAATGCTAACTTAACTTAACTAATCCAATCCA
CACTAGGCTAGAGAATTCCTGGTCATGAAACATAGGGGCCCTG
FMO02468.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4983-RB | 1666 | CG4983-RB | 155..1254 | 7..1082 | 4865 | 97.5 | Plus |
| CG4983-RA | 1330 | CG4983-RA | 146..1245 | 7..1082 | 4865 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11652653..11653600 | 7..954 | 4725 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:21:08 has no hits.
FMO02468.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:40 Download gff for
FMO02468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1235 | 1..1071 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:18 Download gff for
FMO02468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1235 | 1..1071 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:43 Download gff for
FMO02468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4983-RA | 139..1235 | 1..1071 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:43 Download gff for
FMO02468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11652646..11653742 | 1..1071 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:18 Download gff for
FMO02468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11652646..11653742 | 1..1071 | 97 | | Plus |
