FMO02474.5prime Sequence
1205 bp (1023 high quality bases) assembled on 2008-05-23
> FMO02474.5prime
CAGTCGACATGCTGGAGCGCACTCAGGGATTAGTCCGGCTGCACGACGTG
GACAGCTCAGCGCTGCGGCAGCTGATCGATTACACCTACACCGGCGAGAT
CACGATCACCGAGCAGAACGTACAGGTGCTGCTGCCCGCGTCCGGACTGC
TGCAGATGCACTCGGTGCGGGATGCCTGCTGTAAGTTCTTGCTGCGCCAG
CTGCATCCTTCCAACTGCTTGGGCATACGCAGCTTCGCAGATGCCCACTC
CTGCAAGGAGCTGCACACGCGGTCGCATAAGTACGCCCTGCAGAACTTCC
AGCAGGTTGTGGGTACCGAGGAGTTCCTGCTGCTGCCGTTCGAGGAGGTT
CGCGAGCTGATCTCCAACAGCCAGCTGAACATCAGCTCCGAGGAGCGAGT
CTTTGCCGCCGTCATCAATTGGGTGAAACATGACCTGCCCACACGAAGAC
TCCACATTGCCGAGTTGATGTCAAACGTCAGACTGCCGCTGGTGAGCAGG
GATTTCCTCATGAGCTGCGTGGAAACGGAGACCCTCATGCGCGATGACTC
CGAGTGCAAGGAGCTGCTGCTGGAAGCCATGAAGTACCATTTGCTTCCGG
AGCAGCGCAGCATAATGGGCAGCCAGCGAACCCAGGAGCGTCGTCCGGAG
GGCATGAAACCCTACGTATTTGCGGTGGGAGGAGGCAGTCTCTTCGCCAT
TCACAACGAGTGCGAGGTGTACAATCCGCGCTCTAACTCTTGGAGTCCAG
TGGCACCAATGTTGTGGCGACGATCTCGATCCGGAGTAACATCCCTGCAC
AAGCAGTTGTATGTGGTCGGCGGCTACGATGGAGTCAGTGATCTGGGCAC
GGCGGAGAGCTACAATCCTCTGACCAACAAGTGGAGCACATCACCCCAAT
GGGTACGAAACGTAGCTGTCTGGGCATCTGCTCCTACGATGCCTTGATCT
ACGTTTGTGGGGTTACGATGGCGCCTCCTGTCTGGCAGCATGAAGCGCTA
TGATCCGCTCACAGCATCTGGAGCTCCTGTTCGGCGATGAGCACAAGGAG
AGTACTGCCGACTGCTGTGCTGAAAATTGCATCTACAGTCTGGGCGGCTC
CATCCAACCACTACCAGTCGGAGCGTGGACCGATGATCGATTGGATCCTG
GAACCGGTCAGACTGTCGCAACTCAGAACGACGTCCGGCGTCTCTCCTCC
TCACC
FMO02474.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-RA | 2792 | CG15097-RA | 471..1608 | 1..1129 | 5340 | 98.5 | Plus |
| CG15097-RE | 3029 | CG15097-RE | 712..1845 | 5..1129 | 5335 | 98.6 | Plus |
| CG15097-RD | 3029 | CG15097-RD | 712..1845 | 5..1129 | 5335 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18823466..18824572 | 1099..1 | 5110 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:23:07 has no hits.
FMO02474.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:47 Download gff for
FMO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RA | 471..1611 | 1..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:57 Download gff for
FMO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RA | 471..1611 | 1..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:39 Download gff for
FMO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RA | 471..1611 | 1..1132 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:39 Download gff for
FMO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18823432..18824572 | 1..1132 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:57 Download gff for
FMO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14710937..14712077 | 1..1132 | 98 | | Minus |
