FMO02481.5prime Sequence
916 bp (916 high quality bases) assembled on 2008-05-23
> FMO02481.5prime
CAGTCGACATGGCCAGCTCCAATGTCTCGGATTGGGATGAGCCGATGCCC
ACGTCGACGGAGTCGCTGCCCGAGGAGGAGGATCCGGATGTGTGCGCAGA
GGAGAACGTAAAGAAGCGGCGGGAGGAGGAACTGGACAAGCTGGAGTTGT
ATGTGCGGCGCATGGCCTACCAGCCGACACTGCCGCCCAAGGTAAAGCCC
TACGACGTGGCCCTGTCCAAGCCCAAGTTGCACACGCTCATCGACAACTA
CGAGCAGTTCAAGGATGTATACGATCCGAAGCTGCGGGCCAAGCGGATCA
AGCGCATGCTGGGCAAATACAAAGCCATTACCACGGAACAGCTGGAGCAG
ATCCTTAAGAGCAACAAGACCAAGGAGCGAAAGAAGGAGGATTTCCTGAA
GCGCAAGCAGGAACTGTACTACAACATGCTGACCAAGCTGGAGCGCCAGT
GCCGCACCCAGTACCTGAACGTGCTCATCAAGAAGTTCGCCAAATTCATT
TCCCATCTGGCCACAACGATGCGCATTCCGCCGCAGCTGGTGGATCCGTA
TGCGCGCATGCAGCGCGGCATCTTCTGCAACATCCTGTTGGCCATTGGTG
TGCAGCCCACCTCACAGTCGGCCATCTACTACACCAGCCAGGATGCCATC
GAGTACGATGTGTGCCATCGCCTCGCGCACGCGCTGCTCAGTTTGATCAT
TAAGGCGCTGGACTCGGCAGCCACAAGGGATCCCAACGAGCTGGCCAAGC
CGGCCGACTTGGACTTCGAGATGGACAATCACATCAAGCGTCGGCTCATG
TGCGCCGCCGAGAAGAAGCTGCTGTACGAGCGCCGTCGCAAGAAGCCCCA
GCCGCAGGGTCTTGGAGCCTTTGAAAGTGCACCCGCTATGACTGCGACGC
AAGCTTTCTAGACCAT
FMO02481.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15892-RA | 1173 | CG15892-RA | 205..1096 | 8..898 | 4435 | 99.9 | Plus |
| CG15896-RB | 2809 | CG15896-RB | 1815..2376 | 898..338 | 2785 | 99.8 | Minus |
| CG15896-RB | 2809 | CG15896-RB | 2442..2771 | 337..8 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6293183..6293744 | 898..338 | 2760 | 99.8 | Minus |
| X | 23542271 | X | 6293810..6294139 | 337..8 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:50 has no hits.
FMO02481.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:53 Download gff for
FMO02481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15891-RA | 973..1868 | 1..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:58 Download gff for
FMO02481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15892-RA | 201..1096 | 1..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:54 Download gff for
FMO02481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15892-RA | 201..1096 | 1..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:54 Download gff for
FMO02481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6293183..6293744 | 338..898 | 99 | <- | Minus |
| X | 6293810..6294143 | 1..337 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:58 Download gff for
FMO02481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6187216..6187777 | 338..898 | 99 | <- | Minus |
| arm_X | 6187843..6188176 | 1..337 | 99 | | Minus |
