FMO02490.5prime Sequence
584 bp (584 high quality bases) assembled on 2008-05-23
> FMO02490.5prime
ATTATACGAAGTTATCAGTCGACATGCGTCTTGTCCGCAGTAAATGTTGT
CAACGTGATGTTTCTGTAACCGACTATCTGAACACCCCGCATCCGCACCA
GCACCATCCATCGTCCACCGACGTCCAGCACACCAAAAACATATTTACAC
GCTACTGGGACGACCACATAAGAATGAAGGAATCGAGCGAGGGCAAAACC
AGGGCCAAGGCCCCATCCGCTGCCGCATCCGCATCCACCACACCATCGTC
ATCTTCAGCACCTGCCAAACAAACCCAGAGCGTTACGTTCGTGAGGACCA
GTAATGCACCAGCTGTTTGCGACGCCAACGGGAACGGGAATGGGTGCTCC
ATCCAAACGGAGTGGACATTCCCCCCAAAGGCGCCCACACCGCACATCTA
CAATTGCCTGAGTCCGGACATGATGGCCTCAAGTGATAAGAGCAGCTTTA
AGGGATTTCGCAAGCAATTCAGTGGACGGTTCAAGCGCCTAGTTACTCGA
AAAGTGGAACACACTCCAGTGATACCTCCAGAATTGAAGCCGCAACTAAA
AACAATATACGTTTACGCAAGCTTTCTAGACCAT
FMO02490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11791-RA | 1906 | CG11791-RA | 922..1464 | 24..566 | 2715 | 100 | Plus |
| CG11791-RB | 1299 | CG11791-RB | 331..857 | 40..566 | 2635 | 100 | Plus |
| CG11791-RD | 1721 | CG11791-RD | 754..1279 | 41..566 | 2630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25051164..25051557 | 24..417 | 1970 | 100 | Plus |
| 3R | 32079331 | 3R | 25052482..25052632 | 416..566 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:36 has no hits.
FMO02490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:16 Download gff for
FMO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11791-RA | 829..1377 | 24..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:40 Download gff for
FMO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11791-RA | 922..1470 | 24..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:36 Download gff for
FMO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11791-RA | 922..1470 | 24..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:36 Download gff for
FMO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25051164..25051556 | 24..416 | 100 | -> | Plus |
| 3R | 25052483..25052626 | 417..560 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:40 Download gff for
FMO02490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20876886..20877278 | 24..416 | 100 | -> | Plus |
| arm_3R | 20878205..20878348 | 417..560 | 100 | -> | Plus |
