FMO02502.5prime Sequence
716 bp (716 high quality bases) assembled on 2008-05-23
> FMO02502.5prime
CAGTCGACATGTCGCTTCTGGAGCAATACGAACAGCAATACGCCACGTTA
ATAGCAGAAATAACGGCCCATATTGGACGGCTGCAGCAGCAAAACAACAA
CAGCGAGCGCCATGATTTGTGCAGCAAGATCGACTCCAGTTTGCCCGAGG
CTCAGGAATTGCTGGAGCAGATGGGTCTGGAGGTGAGGGAGCTAAATCCT
GGACTGCGGAGCAGCTTCAACGGAAAGCTGCAGGTGGCCCAGGCAGAACT
GAAACGGCTGCAGGCGGAGTACAGGTTGACCAAGGACAAACAGCGCTCCC
AAGCCAACACATTCACCACTCTGGACTTGGGTGACAGCTATGAGGATGTG
TCCATAAGTACAGATCAACGCCAACGCCTCTTGGACAACTCGGAAAGGAT
TGAACGGACGGGCAACAGGTTAACCGAAGGGTACAGAGTGGCCTTGGAGA
CGGAGCAACTGGGCGCCCAGGTCCTAAATGATCTGCACCACCAAAGGGAA
ACTCTACAGGGAGCCAGGGCTCGACTTCGAGAAACCAATGCCGAGCTGGG
AAGAGCTTCTCGCACTCTGAATACCATGATGTTAAGAGCCCTGCGGGAGA
AGGTGGTCTTGTATGGAGTGGGTGTCTGCTTTGTGGTGGCCGTGGGCGTC
AGTCTCTATCTGACCTTCGCACCCAGTTCAAGCAGCACCGCCTCGTCGGC
AAGCTATCTAGACCAT
FMO02502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vti1-RA | 1370 | CG3279-RA | 142..831 | 9..698 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 692025..692620 | 698..103 | 2980 | 100 | Minus |
| 3L | 28110227 | 3L | 692670..692778 | 117..9 | 485 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:38:58 has no hits.
FMO02502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:14 Download gff for
FMO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3279-RA | 133..832 | 1..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:16 Download gff for
FMO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..836 | 1..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:38 Download gff for
FMO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..836 | 1..706 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:38 Download gff for
FMO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 692020..692620 | 103..706 | 99 | <- | Minus |
| 3L | 692685..692783 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:16 Download gff for
FMO02502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 692020..692620 | 103..706 | 99 | <- | Minus |
| arm_3L | 692685..692783 | 1..102 | 96 | | Minus |
