FMO02503.5prime Sequence
1234 bp (1031 high quality bases) assembled on 2008-05-23
> FMO02503.5prime
CAGTCGACATGGCTTCGATTGTGGAGAAAGTGCGTCGCATTTTGGACTCA
AAAGATCTGGGCGACATCACAACGGAACTGTGTGACTTTTCTCTTAAGGA
ACAGAATGCCACCGCCGAGGCCCAGGGAGTACAGCCCTCATCCGCATCCG
ATTTTGTGCCCATTCTTGGACAGACAGTCACCTATATTGTGGCCTGTGTG
TTGATCAATGAGCACGACGAGCTTCTGATGATCGAGGAGGCCAAACAGAG
CTGTGCCGGCAAGTGGTACTTACCCGCTGGTCGCATGGAAAGGGGCGAAT
CCATCACGGAGGCAGCCGCCCGGGAAGTTTTCGAAGAGACTGGTCTAAAT
GCCGAGCTGACCACTCTATTAGCGGTGGAGGCCGCCGGTGGCTCTTGGTT
CCGCTTCGTGCTCACTGGACGCATCACAGGCGGCCGACTTAAAACTCCTG
CGGATGCAGACGCCGAATCGATTCAGGCGAGATGGGTGCGTAATCCCAAG
GAAGTACCTCTCCGAGCCAACGACATACTCAGTATCATTGAGATTGGAAG
GGCGTATCATCAGGGGCAAAAGATTGCCATTAGCCCTTCACCCTGGCATG
GGACCATACTGCCCACACGTTTCGCCCACAAACGTAACTATCTGCGGGTT
CTGGCTGTAGCCAGAAAGCGAGCACACAACTCGCTGAACATCCTGGTCAG
TGAAAAGAACGCCCACCACTTTCCCACGGTCGAACTGCATCCGAATCGCA
GCCTGCACTCTACGCTGCGCAAGTTCATGATTGAGATTTTTGGTGCGGAG
CTGCCACAGCATCGACCACATGGCTTACTTAGCGTGGAGCACTCAGCTTC
GGAGCAGGAGAACACTGATGGAATATGCCTTAATCTGCTGGTGGCCTTCC
GACCGCCACTGGGAGGAAATCTTCGCTGATCGGCAGTTGCATTTGGCCAG
GAACTGGGGTGCGCCCCCTTGACGAGATGCTGGGACCGTTATCGTCAGCA
GCAAGACCGCATCCATTCCGCTGAATGTGGTGCCGCCCCAAGCTTTTCTA
GATCATTCCGTTTGGCGCCGCCGGGCCCAGGTAGTGTCATATTCATAATC
AATCCATAATTCATATTCCCACCTAGCCCTAGGGAGATCCTGGTCATTGA
CTATGGCCTGAATTCCCACCAATAAAAGCCCCGGGCGCACCCCGAGCGAT
CTGGAACAACAATCATCCAGAGTGTAGAGATCTG
FMO02503.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10898-RA | 1969 | CG10898-RA | 599..1616 | 9..1033 | 4875 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11558756..11559524 | 258..1033 | 3475 | 98.3 | Plus |
| 3R | 32079331 | 3R | 11558435..11558685 | 9..259 | 1255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:51 has no hits.
FMO02503.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:15 Download gff for
FMO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-RA | 642..1668 | 1..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:29 Download gff for
FMO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-RA | 642..1668 | 1..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:27 Download gff for
FMO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-RA | 595..1621 | 1..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:27 Download gff for
FMO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11558431..11558684 | 1..258 | 98 | -> | Plus |
| 3R | 11558757..11559540 | 259..1052 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:29 Download gff for
FMO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7384153..7384406 | 1..258 | 98 | -> | Plus |
| arm_3R | 7384479..7385262 | 259..1052 | 97 | <- | Plus |
