FMO02505.5prime Sequence
1214 bp (1027 high quality bases) assembled on 2008-05-23
> FMO02505.5prime
CAGTCGACATGAAGGTGAAAATGATTAGTCGCAATCCGGATAACTATGTC
CGAGAAACCAAACTGCAACAGCACAAAATGCCCAGGAACTACGATCCTTC
GCTGCATCCTTTGGAGGGTCCCAGGGAATACGTGCGTGCCCTGAATGCCA
CCAAGTTGGATCGAGTATTTGCCAAACCCTTCGTCTGCAATTTGAGCGGG
CATCGCGATGGAGTCTCCTGCTTCGGAAAGCATCCCAAGCAACTTTCCAC
CTTGGCCACCGGCGCCTATGACGGCGAAGTGCGCATTTGGGACTTGGCGA
ATCGTATCAGCTCTCGGAACTTTGTGGCCCACGACGGTTTCGTTCGCGGC
ATTGCTTACACCCAGAACGGAGGTCGCATTTTCACCGTGGGAGATGATAA
AACCATCAAGGTTTGGAAAGCAGAGGCTCCGGAAGTCGGCGAGGATGAGG
TGCCGGTGAACACTATACTGAGTAAATTTGGACTGCACGGCATCTCGCAC
AATCGCAGGGATAACAAGTTCGCCACCTGTGGCGAGGTATGCGCCATTTG
GGACGAAAGGCACAACGATCCTTTGAAGACATTGAAGTGGGGCGTCGATA
CCCTTCACACCATATCCTATAACCCCGTGGAAACAAGCATCCTGGCGTGC
TGTGCCAGCGATCGCAGCATTATCCTGTACGATCAGAGAGAGGCGCAGCC
ACTAAGGAAGGTCGTCCTAACCATGAAAGAGCAACAAGCTCGCGTGGAAT
CCCATGGAGGCGTTCAACTTCACAGTGGCCAACGAGGATTGCAACCTTTA
TACCTTTGACACTCGCAAGCTGCAAACGCCGCTGAAGTTCACTTTGACCA
TGTTTCCGCTGTCACCGATGTTGACTACTCGCCCACTGGCAAGGAATTCG
TCTCGGCCAGCTACGACAGACCATTCGGATCTACAATGCCACCACAGTCA
CTCGCGGGATATTTACACACAACGCATGCAGCATGTGTCTGGGTGGCCTG
TCCCTCGATAATCGATACGTTTTCTCCGCTCGACGAATGACGTCGCATGT
GAAAGGCAATGCCTCCGAAAGCTGGGCGTCATCGTCCACGTGAGCGCGTC
AATTTCAAATAACAAGGAGGGCCTGAACAAAGATGCCGCTCATTCCGGAT
CAGGCATCGGTCACTGCCAGGTGCGCTCAGGTCTAAGTCCAAAAAAGATG
TGCTCCACGTTCAT
FMO02505.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7275-RA | 1495 | CG7275-RA | 102..1253 | 9..1143 | 5165 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15499182..15499896 | 79..794 | 3530 | 99.9 | Plus |
| 3L | 28110227 | 3L | 15499953..15500282 | 795..1108 | 885 | 93 | Plus |
| 3L | 28110227 | 3L | 15499060..15499129 | 9..78 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:29:17 has no hits.
FMO02505.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:18 Download gff for
FMO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 89..1229 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:41 Download gff for
FMO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 94..1234 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:55 Download gff for
FMO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7275-RA | 94..1234 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:55 Download gff for
FMO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15499953..15500300 | 795..1127 | 93 | | Plus |
| 3L | 15499052..15499129 | 1..78 | 94 | -> | Plus |
| 3L | 15499182..15499896 | 79..794 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:41 Download gff for
FMO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15493053..15493400 | 795..1127 | 93 | | Plus |
| arm_3L | 15492152..15492229 | 1..78 | 94 | -> | Plus |
| arm_3L | 15492282..15492996 | 79..794 | 99 | -> | Plus |
