FMO02507.5prime Sequence
1240 bp (1002 high quality bases) assembled on 2008-05-23
> FMO02507.5prime
ATTATACCAAGTTATCAGTCGACATGGCCAGCACAGACATTCCCATGGAG
GCAGCTGTGGAATCGGCGACCGGCATCACGCCCAATTCAAATGCGAACTC
AAACAATGTGGCGAAGAAGCTGCCCGCGGAGGGCTCCACCGGTGATAATC
CCAATGCCAACGCCGACGAGATGACGTCCCGCGACTATTACTTTGACTCC
TATGCCCATTTCGGGATCCACGAGGAGATGCTCAAGGACGAAGTGCGCAC
CGTCACATACCGCAACGCCATGTACCACAACAAGCATCTGTTTCAGGGCA
AGACCGTACTGGACGTGGGTTGCGGTACCGGCATTCTCTCCATGTTCGCT
GCCAAAGCCGGTGCTGCTCAGGTGATTGCCGTCGACTGCTCCAACATCAT
TGAGTTTGCCCGCCAAGTGGTCATTGACAACAATCTGCAGGATGTAATCA
CGGTTGTCAAGGGCAAGATTGAGGAGATTGAGCTTCCAAATGGTATTGAG
GGAGTGGACATTATTATTTCCGAGTGGATGGGTTACTGCCTGTTCTACGA
ATCCATGCTGGATACAGTGTTGTACGCTCGGGACAAGTGGCTGAAGAAGG
ACGGCATGATGTTCCCAGATAGGGGCACGCTGTATATCACGGCCATCGAG
GACAGACAGTACAAGGACGAGAAGATCAACTGGTGGGACGATGTCTACGG
CTTCGACATGAGCTGCATTCGTAAGGTGGCCGTGACCGAGCCACTGGTCG
ACGTGGTCGATCCCAAGCAAGTGGTATCCACATCTTGCATGGTCAAGGAG
GTGGATCTGTATACCGTGCAAAAGCCGATCTTAACTTCTCGTCCAAGTTC
AGCCTATGCATCAAGCGCAACGACTTCGTGCAGGCATTAATCACCTACTT
TAATATAGAGTTCACCAAGTGCCACAAGCGTCTTGGGTTCAGTACGTCAC
CAGACTCCACATACCACGCATTGGAAAGCAAACCGTGTTCTTACCTCGAT
GACCACTGACGGCAAGAGACGAGGAGATCACTGTACGTTCCAAATGAAGC
CAACGAAGCGGAACACGTGACCTGGACTTCGTCATCGACATTAATTCAAG
GGCGAAATTTTCTCAATTCAGGAGTTCGAACCATACCGCCATGCCGGCAA
GCCTTCTGACACATTCGAGGCGCGGCCCAAGCTATGTCTATCAAATCATA
TCATAATCATAACCAACACATGCCCATAGAGAACTCCTGC
FMO02507.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art1-RA | 1528 | CG6554-RA | 113..1234 | 24..1139 | 5140 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10786789..10787388 | 1125..532 | 2280 | 95.4 | Minus |
| 3R | 32079331 | 3R | 10787773..10788049 | 302..26 | 1385 | 100 | Minus |
| 3R | 32079331 | 3R | 10787475..10787706 | 532..301 | 1160 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:21:29 has no hits.
FMO02507.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:21 Download gff for
FMO02507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6554-RA | 95..1225 | 24..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:28 Download gff for
FMO02507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art1-RA | 113..1243 | 24..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:52 Download gff for
FMO02507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art1-RA | 113..1243 | 24..1151 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:52 Download gff for
FMO02507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10786819..10787387 | 533..1096 | 97 | <- | Minus |
| 3R | 10787475..10787704 | 303..532 | 100 | <- | Minus |
| 3R | 10787773..10788054 | 19..302 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:28 Download gff for
FMO02507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6612541..6613109 | 533..1096 | 97 | <- | Minus |
| arm_3R | 6613197..6613426 | 303..532 | 100 | <- | Minus |
| arm_3R | 6613495..6613776 | 19..302 | 99 | | Minus |
