FMO02508.5prime Sequence
461 bp (461 high quality bases) assembled on 2008-05-23
> FMO02508.5prime
CAGTCGACATGGCGAATACATCAAGTACCGGCGTTGTGGTGCCACGGAAT
TTCCGCTTACTGGAGGAGCTGGATCAGGGCCAGAAGGGCGTGGGCGATGG
CACCATATCGTGGGGCCTGGAGAACGACGACGACATGACGCTCACCTACT
GGATCGGCATGATCATCGGTCCGCCTAGAACACCATTCGAGAATCGAATG
TATTCACTAAAGATCGAGTGCGGCGAACGCTATCCGGATGAGCCACCAAC
GCTCCGGTTTATAACTAAAGTAAACATTAACTGCATTAATCAGAACAATG
GCGTGGTTGATCATAGATCAGTTCAGATGTTGGCCAGATGGAGTCGCGAG
TACAATATAAAAACGATGCTGCAGGAAATCCGTAGGATTATGACCATGAA
AGAGAACCTGAAGCTGGCACAGCCGCCAGAAGGTAGCTGTTTTGCAAGCT
TTCTAGACCAT
FMO02508.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uev1A-RC | 1189 | CG10640-RC | 27..461 | 9..443 | 2175 | 100 | Plus |
| Uev1A-RA | 1196 | CG10640-RA | 70..504 | 9..443 | 2175 | 100 | Plus |
| Uev1A-RB | 1609 | CG10640-RB | 207..615 | 35..443 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5364943..5365086 | 179..36 | 720 | 100 | Minus |
| 3L | 28110227 | 3L | 5363878..5364016 | 443..305 | 695 | 100 | Minus |
| 3L | 28110227 | 3L | 5364082..5364209 | 307..180 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:29:23 has no hits.
FMO02508.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:22 Download gff for
FMO02508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10640-RA | 66..504 | 1..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:45 Download gff for
FMO02508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uev1A-RA | 66..504 | 1..443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:58 Download gff for
FMO02508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uev1A-RA | 66..504 | 1..443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:58 Download gff for
FMO02508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5363878..5364015 | 306..443 | 100 | <- | Minus |
| 3L | 5364084..5364209 | 180..305 | 100 | <- | Minus |
| 3L | 5364943..5365085 | 37..179 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:45 Download gff for
FMO02508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5356978..5357115 | 306..443 | 100 | <- | Minus |
| arm_3L | 5357184..5357309 | 180..305 | 100 | <- | Minus |
| arm_3L | 5358043..5358185 | 37..179 | 100 | <- | Minus |
