FMO02512.5prime Sequence
1164 bp (990 high quality bases) assembled on 2008-05-23
> FMO02512.5prime
CAGTCGACATGAGATCCGAAATTTTGGCAAGCGCCTTTTTGGGCCTGGCG
GTTAGGTCGATTATCTCGCTGTACTCCTACTCCGGCTTCGATTCCCCGCC
GATGCATGGCGACTACGAGGCCCAGCGCCACTGGCAAGAGATCACGGTCA
ATCTGGCAGTGGGGGAATGGTACACAAACAGCTCCAACAACGATCTTCAG
TACTGGGGCCTGGATTATCCGCCTCTGACGGCCTACCACAGCTATTTGGT
GGGTCGCATAGGAGCATCCATTGACCCCCGCTTCGTCGAGCTGCACAAGA
GCAGGGGATTCGAGTCGAAGGAGCACAAACGCTTCATGCGCGCAACAGTT
GTTTCTGCTGACGTGCTCATCTATTTGCCGGCAATGTTGTTGCTGGCCTA
TTCCCTAGATAAAGCCTTTCGAAGCGATGATAAATTGTTCCTATTCACGC
TGGTGGCCGCGTATCCCGGACAAACACTCATCGACAATGGACACTTTCAG
TATAATAATATATCACTGGGCTTTGCCGCCGTGGCAATTGCCGCAATCTT
GCGAAGAAGATTCTACGCGGCTGCATTTTTCTTCACTTTAGCCCTTAATT
ATAAGCAAATGGAGCTGTATCACAGCTTGCCGTTCTTTGCGTTCCTTCTG
GGTGAATGTGTAAGCCAAAAAAGCTTTGCTTCTTTTATCGCTGAAATCTC
ACGGATAGCAGCCGTTGTCTTAGGAACATTTGCTATTTTATGGGTTCCTT
GGTTGGGATCTCTGCAGGCCGTACTTCAAGTACTCCATCGCCTGTTTCCT
GTCGCCCGAGGAGTTTTTGAGGACAGGTGGCCCATGTTTGGTGTGCCGTC
AACGTAGTTTGGAAACTAAAGAAGCATATCAGCAATGACCAATGGCCCTT
GTGTGCATTGCATGCACGTTAATTGCATCTTTGCCACAATGTACTACTCT
TTCGAAGGCGACTATGTCCGATTTCTATAGCGCCTTTCAACACGAGCTGG
CATTCTTTCTTGTTTTCATTTCAGTGCACGAGAAGACATTTGGCTGACTG
CTTTACCAGCCCTTTTCTACTTAAGGTGCTGGCCCGAGATGATTTATTTG
AGTAACGGATTCCAGCATTTTGCTCTTCTAACAAGAATTAATTGTTCGGT
TCCGCCGGCTATAT
FMO02512.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gny-RB | 1521 | CG5091-RB | 47..1203 | 9..1146 | 5055 | 97 | Plus |
| gny-RA | 2557 | CG5091-RA | 47..1203 | 9..1146 | 5055 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10380149..10380813 | 9..673 | 3325 | 100 | Plus |
| 2L | 23513712 | 2L | 10380911..10381111 | 672..871 | 940 | 99 | Plus |
| 2L | 23513712 | 2L | 10381163..10381321 | 871..1023 | 395 | 91.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:43:56 has no hits.
FMO02512.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:11 Download gff for
FMO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5091-RA | 32..1135 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:54 Download gff for
FMO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gny-RA | 47..1150 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:41 Download gff for
FMO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gny-RA | 47..1150 | 9..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:41 Download gff for
FMO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10380149..10380813 | 9..673 | 100 | -> | Plus |
| 2L | 10380913..10381110 | 674..870 | 98 | -> | Plus |
| 2L | 10381163..10381322 | 871..1023 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:54 Download gff for
FMO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10380149..10380813 | 9..673 | 100 | -> | Plus |
| arm_2L | 10380913..10381110 | 674..870 | 98 | -> | Plus |
| arm_2L | 10381163..10381322 | 871..1023 | 93 | -> | Plus |
