FMO02523.5prime Sequence
1225 bp (1015 high quality bases) assembled on 2008-05-23
> FMO02523.5prime
ATAATACGAAGTTATCAGTCGACATGCAGCTTATCAAGTGCTTGGTTATA
ATTCAGCTGTCCCTCTTGCTGGTGGAGGAGTCATTTGCCGGCCGGGACTT
CTACAAAATACTGAACGTAAAGAAAAACGCCAACACGAACGAAGTGAAGA
AGGCGTATCGCCGTTTGGCCAAGGAGCTGCATCCGGATAAGAACAAGGAC
GACCCGGATGCCTCCACAAAGTTCCAGGACCTGGGAGCGGCCTACGAAGT
CCTCTCCAATCCGGACAAACGGAAGACCTACGACCGCTGCGGCGAGGAAT
GCCTCAAGAAGGAGGGCATGATGGATCACGGTGGTGATCCGTTCTCTAGC
TTCTTTGGGGACTTCGGCTTTCACTTCGGTGGTGATGGCCAGCAGCAAGA
TGCTCCGCGAGGCGCCGATATCGTAATGGACTTGTACGTTTCCCTGGAGG
AGCTATACTCCGGAAACTTTGTGGAAATTGTGAGGAACAAGCCTGTAACG
AAACCCGCCTCAGGCACCAGGAAATGCAACTGCCGCCAGGAGATGGTCAC
CCGGAACCTTGGACCCGGGCGCTTCCAGATGATCCAACAGACGGTGTGCG
ACGAGTGTCCCAACGTGAAGCTAGTCAACGAGGAGCGCACATTGGAGATC
GAGGTGGAACAGGGCATGGTCGACGGCCAAGAGACGAGGTTCGTGGCCGA
GGGGGAGCCACATATCGATGGGGAGCCCGGCGACCTCATTGTGCGGGTTC
AACAAATGCCGCATCCGCGATTCCTGCGCAAGAATGATGATCTGTACACG
AACGTGACCATCAGTCTGCAGGATGCCCTTGTCGGCTTCTCCATGGAGAT
CAAGCACCTTGATGGACACCTGGTGCCCGTCACGAGAGAGAAGTAACGTG
GCTCGGCGCTAGAATCCGCAAGAAGGGCGAGGGCATGCCCAACTTTGAGA
ACACAACCTCACCGGCACCTGTACATCACCTTCGATGTGAGTTCCCAAGA
GGATCTTACGGAGGAGACAGAAGCGCTCAGAAAAATACTCGACCAATCTC
ATCAATCGCATTATACAATGGACTGCCAAGCCTTTCTAGAACATTCGATT
GGCGCGCGGGCCAGTAACGTGTCTAATCAAAATCTAATCCCTATTGTATC
CACTAGCCTAGGAGATCTTGTTCATGAACATGTGCTTGAATCCTACACAA
ATTAAAACGCGCCTCGCGCGGCGTA
FMO02523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4164-RA | 1488 | CG4164-RA | 151..1216 | 20..1075 | 4985 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 453258..454260 | 20..1016 | 4690 | 99 | Plus |
| 2L | 23513712 | 2L | 454803..454919 | 905..1016 | 310 | 92.3 | Plus |
Blast to na_te.dros performed 2014-11-28 21:41:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 1348..1483 | 484..621 | 126 | 57.6 | Plus |
FMO02523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:27 Download gff for
FMO02523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4164-RA | 148..1217 | 20..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:53 Download gff for
FMO02523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4164-RA | 151..1220 | 20..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:08 Download gff for
FMO02523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4164-RA | 151..1220 | 20..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:08 Download gff for
FMO02523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 453258..454270 | 20..1023 | 98 | <- | Plus |
| 2L | 454330..454354 | 1024..1048 | 92 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:53 Download gff for
FMO02523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 453258..454270 | 20..1023 | 98 | <- | Plus |
| arm_2L | 454330..454354 | 1024..1048 | 92 | <- | Plus |
