FMO02525.5prime Sequence
1184 bp (988 high quality bases) assembled on 2008-05-23
> FMO02525.5prime
TACAATACGAAGTTATCAGTCGACATGCCGCCGGAAATGGAGATCATAGT
GGGCACCTACGAGGAGGTCCTGCTGGGCTTCAAGCTCATCAAATCGCCGA
CTGACGGCTTGACCGATTCCGTCAAATTTGAGCTGAAACAGACTTTTGCA
GACAGCTCCCATGCAGGATCCATTACATCGGTGGCCGTGCAGTGGCCTTG
GGTGGCCAGTGGCGGTACCGACGACAGGATCTTCGTCTACGACATGCGCA
CGCGGAAACAGTCGCAGATCATACTCTCGCACGCCGGAAGAGTGAACACA
CTGAAATTCACACCTGACCTGTCGCACTTGCTCTCCGGGAGCGACGATGG
CCATATGATCGCCACACGCGTGGGCAGCTGGACCAAAGAGGGTGATTGGC
AGAAGGCCCATGCCGGACAGGCCGTCACCCACATCAGTTGCCATCCCAGC
AGCAAGTTGGCCTTATCTTTGGGCGGCGACCAGGTGCTGAACACCTGGAA
TCTGGTCAATGGCCGCGTCGCCTACAAGACCAATTTAAAGAACAAGGCTA
CGCTGGGTCTCCAACCGGGCTGCTTGTCGTGGTCCAAGCAGGGCGATCAC
TTCACACTTAGCGGTCCATTGGTTCTGGAGATCTGGGGCATCGAGAACGC
TCATGTTATGCGTCGCATTGAGATGCCGGCGAAACCCATTTGCATCACCT
GGCTGGATGGGAACGAGTGTTTAACTGGCCTGGACAACGGCAACATTGCC
TGGATTTCCCTCAAGGACGAGGATGATACACCACCCACCTTCATTCTTGC
ACACGAGGCAAGGGTCAAGGCCATCGCCTATCTGACGAATTACTGGCCAC
CGTCTCCAGCGCTGGTGAATCAAAGTCTGGAAGATCGACATGAAACGCGC
AAGCTGGAGGAGATTGCCAGCAGCTTCATGGACTGCCGACCCACGACTTG
GGCCTGCTGGATCTCCGGCAGTTCGGCAATGTCCACCGGTGGACCACCCA
TTAAGGTGGAGAAACCCAAGGCAAGTGGAGTCTGACAAGTGCCAGGCTGA
CCTCGGGAATCGGACCTCGATACGACCAGATAAATCTGATGCCGAGAAAA
TGTAATGGTAAGAAACCGATCCGGCAAAGGCCCAGAAGCCGAGACTTGAG
AGCCACTCTCTCGGGAGAAAGGGGAAGGGCCTGA
FMO02525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12608-RA | 1616 | CG12608-RA | 134..1234 | 24..1098 | 4815 | 96.9 | Plus |
| CG9123-RA | 1592 | CG9123-RA | 137..1170 | 24..1044 | 4285 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15343733..15344492 | 783..24 | 3800 | 100 | Minus |
| X | 23542271 | X | 15341222..15341981 | 783..24 | 3395 | 96.4 | Minus |
| X | 23542271 | X | 15343374..15343507 | 985..855 | 505 | 97 | Minus |
| X | 23542271 | X | 15340864..15340996 | 984..855 | 455 | 94.7 | Minus |
| X | 23542271 | X | 15343597..15343673 | 859..784 | 335 | 98.7 | Minus |
| X | 23542271 | X | 15341087..15341162 | 858..784 | 300 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:56 has no hits.
FMO02525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:40 Download gff for
FMO02525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-RA | 123..1159 | 24..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:10 Download gff for
FMO02525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-RA | 134..1170 | 24..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:37 Download gff for
FMO02525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-RA | 134..1170 | 24..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:37 Download gff for
FMO02525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15343349..15343502 | 860..1008 | 94 | <- | Minus |
| X | 15343597..15343673 | 784..859 | 98 | <- | Minus |
| X | 15343733..15344492 | 24..783 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:10 Download gff for
FMO02525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15237382..15237535 | 860..1008 | 94 | <- | Minus |
| arm_X | 15237630..15237706 | 784..859 | 98 | <- | Minus |
| arm_X | 15237766..15238525 | 24..783 | 100 | | Minus |
