FMO02526.5prime Sequence
1213 bp (1050 high quality bases) assembled on 2008-05-23
> FMO02526.5prime
CAGTCGACATGCAGAGCCCTGCCTTCGCGTACCGGGAACACGCAGAACAC
TCGCCGCGCGCCATGTACATGCGCGACTGGCGATCGGCCCTGCGGACGCC
CACGTACCGGATTGGGAATCGGACGGTGCGCTTTAACTATCACTTCGCCC
TTCTGATTGTTTGCGCCTTCGTACTCGTCCTACTCTTCTACTTTGCGCGC
CAGGGATCGCACTCCTCCTCCGACGGCTACTGGCTGCGCCGCAGTTACAC
GGATGCCCGGAGTCTGGACAATGGTGGTCCAGTGGTCCAGGCCTACAATG
CCACATATCCGCTCACGTCACCCATGGTGCTGCGTGGCGGTGTGATAAAC
TACCGGATAGCCATGATTGCCGATCTGGACACCAGTTCCAAGGTGAGCAA
GGGCGATGGGAGCAGCACGTGGCGTAGCTACCTGAAGAAGGGCTACCTTA
CCTACACGGTGGCCAGGTCAGAGATCCAGATTAGCTGGGATGACGGGGCG
CCGATAGTCCTGGAATCAGCATTTGCCCTTAAGGGCCGCGGAATGGAGCT
ATCTGAGCTAGTCACCTTCAACGGGCGCCTGCTCACCTTCGACGACCGAA
CGGGTTTGATATACGAGATTGTGAATGACAAGCCCATTCCCTGGGTGATC
CTGCTCGATGGAGACGGACACAGTGCCAAGGGCTTCAAGGCCGAATGGGC
CACAGTGAAAGAGCAAACGCTGTATGTGGGCTCCATGGGCAAGGAGTGGA
CGACAAGTGCGGGTGATTTCGAGAACAATAACCCCATGTACGTAAAGGCC
ATCACTCCGTCCGGCGAGGTGAGGTCGCTCAACTGGGTGGACAATTTCAA
GCAGTTGCGCCTGCAGTCGATGCAAATAACCTGGCCGGGCTACATGATCC
ACGAGAGTGAACCTGGTCAGAGGAAGGATCGCTGGTTTTCCTGCCTAGGC
GTGTTCGAAGAGAATACACGAAACCAGACGAGCACATGGGCTGCATGTCC
TGTCTCGCGACGAAGCTTCACCACGTTGAGACTGTACGCTCGATCTGAAA
TACCACCGCCCCCCGCATGTTTCCTCTAGCTTTAGGTCTTGCCCGAACGG
ATGACCTCATATCTGGCTCTAGGTCGGAGGGTTGAATGCAGACGCCACCT
TCACTCCAGCCTCCGAATTGCGCGGCCAGAAACGTGCTGTCCCAATCGAG
AATCTCGGAACGG
FMO02526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5276-RB | 1608 | CG5276-RB | 98..1318 | 9..1204 | 4995 | 95.8 | Plus |
| CG5276-RA | 1752 | CG5276-RA | 242..1462 | 9..1204 | 4995 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11431979..11432925 | 9..951 | 4555 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:35 has no hits.
FMO02526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:41 Download gff for
FMO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5276-RA | 235..1312 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:16 Download gff for
FMO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5276-RA | 235..1312 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:53 Download gff for
FMO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5276-RA | 235..1312 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:53 Download gff for
FMO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11431972..11432940 | 1..963 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:16 Download gff for
FMO02526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7257694..7258662 | 1..963 | 98 | -> | Plus |
