FMO02537.5prime Sequence
1234 bp (1059 high quality bases) assembled on 2008-05-23
> FMO02537.5prime
CAGTCGACATGGGAGCAAAGGCAACAAAAATGGAAGGTGAATATCTGCCG
GATACGCCGACACTAAACAAAATGCGCCTGGCCAGCGAAAAGCGAGAACA
AATGGAAATGACGACGCCGAATCGAGAGCAAAACAACGCTTTGCTCGATC
CTCGATCACCAAATGGCTGCCGCACGCCTTTAACCTTCTTGCAGGCGTCA
AAACCTCGCGTTGAGGAGGAGGAGCAGCATGTGACCACCAGTGAAAATGC
CTTCTCCATGCTGCGAAAACGTTTGCTCAAGGGCTTCTCCCTGAACGATC
CTCGCTCTCCTCAGCTGAATCGCACTCCACTGGTCCTCGATGAGGTTCGT
TCGCTTAATATGGATGACACATTCGCCGATCTCTTCGTGGACACCAGGGT
GGGTACAGCACAGAGAGCAGTGCCTGCATCACCGCCCCAAGTGGATTTAG
AGGAGAGCTGCGATAGCTTCGGCACACCGCCGTCTGCTGCACACAACAAT
ATTTCCCTGGAGATTGTTTCACTGCCCTATGATCAGGAAGAAACCTTGCC
TTGCGAGCAACAGCTGCTGCCGTATCAGGAGCCGAATCTGGAGCAGGGCC
AGGTGAAAATGGCCACGCCCCCGCCAGAACAGCAGCCCCATGGTGATCCC
CGATCGCCCAGCCTGGGCGTCGATCGCACACCCATCATCTTCTGCGACGA
CGAGGAGGAGGAGGCACGCGAGGCCCAGATGCTGGAGCACATCCTGAAAA
CACTGACCCTGAATCTCAGCACTGGCAGCAGCATGGCCTCCTTTGTCGCT
GGCGAGGAGCAGCTACCAGAAGTGCCGTCGAACAAACATTTGGAGCGAGT
GCGTTTGGGTCACAAGCGTCGTGTGCCACCGCGCAAGCCCGCCAGAGCCA
ACAAGCCAAGATCTATGTTGACCAAGAGGAGGGGTCCCGGTGACCGGAGG
ATCCATTACGCCCAGGACAAACAGTACCCCCCTGTCCGCACAAAGCGACT
CCACTCAGTTGCGTTAGATAGCCGCATCTGCGATCCGTTCAATGGAAAGG
ATCTAGAAGATCGATTCCGCCCGCCAAAGCTTCCACCGATCACTGCGGAT
ATCCTCTGGCACAGAGGGATTCACGGACGTTCCTAGCTTCCTTGAACACA
CTTTCGCTCGTTTGGGCGCGGGCAGTAGGTCCAACTAATCAATACCTAAC
CTATTCCACACTAGACTCTATGGAGAATCGTGGG
FMO02537.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msb1l-RA | 1366 | CG10364-RA | 98..1232 | 9..1128 | 5165 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19578040..19578910 | 186..1048 | 3950 | 98.5 | Plus |
| 2L | 23513712 | 2L | 19577798..19577974 | 9..185 | 885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:18:43 has no hits.
FMO02537.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:56 Download gff for
FMO02537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10364-RA | 94..1228 | 9..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:57 Download gff for
FMO02537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msb1l-RA | 98..1232 | 9..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:18 Download gff for
FMO02537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msb1l-RA | 98..1232 | 9..1128 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:18 Download gff for
FMO02537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19577798..19577974 | 9..185 | 100 | -> | Plus |
| 2L | 19578040..19578997 | 186..1128 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:57 Download gff for
FMO02537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19577798..19577974 | 9..185 | 100 | -> | Plus |
| arm_2L | 19578040..19578997 | 186..1128 | 97 | | Plus |
