FMO02541.5prime Sequence
1198 bp (1043 high quality bases) assembled on 2008-05-23
> FMO02541.5prime
CAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGCAGCACGGA
GTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCCAATGGTGG
CAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGATGAAGCTGC
GCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTACGCGAACGC
TACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAACACCTGTC
GCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACATCCAGCCGC
GCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCACAGTCCGCC
AACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAATGGCTCCAT
GAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCTTTACCACC
AGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTGCTGCATCT
GCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGACCAGGTGTT
CAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCACATATCAC
AGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAATGGCTGAT
TCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTGGGCATGAA
CGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATCCTCGATGA
AATCACCGCTGTCGTCGCCGCTGCAAGGAATTGGGGCAGGATCCCATCAT
CCTCAGCAGCAGACGCAACAACAACAGCAGCAGCAGCAGCAACAAGCGCA
GCAACAGTCGCCGGCATCTGAACAGCAGCTTCCGGTGGTACATTCCTCTT
CCAGCGCCACGGGCGCTTCCATCGGCACAGTTCCACTCTGCAGATGCACA
GTCACATGTCTATACCCCAGGCGATGGTCTAGACTCTTCGTCATCGAGCC
ATTTCATATGAAGAACCCCGTATTCACTAAATGGCCATGCCCATACAGAT
GACCAGCAATGGTAGTCACTTTGCATGACCTCGACGAAAGAATTCGAATG
AAACCGTCATGATCTGGATGGAGCGCGCAGCTATGGATGCACAGGAATCC
CTTACCGGCATCTCAAGGCCATGGACGCGGGCAAGGAAAATGGTTATC
FMO02541.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..1216 | 9..1146 | 5165 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11309079 | 159..1073 | 4185 | 98.6 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 9..159 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:47 has no hits.
FMO02541.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:00 Download gff for
FMO02541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1154 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:23 Download gff for
FMO02541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1159 | 9..1087 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:19 Download gff for
FMO02541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1159 | 9..1087 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:19 Download gff for
FMO02541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 9..159 | 100 | -> | Plus |
| 2R | 11308156..11309095 | 160..1087 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:23 Download gff for
FMO02541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 9..159 | 100 | -> | Plus |
| arm_2R | 7195661..7196600 | 160..1087 | 98 | | Plus |
