FMO02557.5prime Sequence
1214 bp (1005 high quality bases) assembled on 2008-05-23
> FMO02557.5prime
CAGTCGACATGAAAGACACCGAGGTCAACGACAACACCACAGAGGAGGAG
CCCGTGAAGGAGGCACCTGAGGTGCCGGCCAATTCCAGCTCCGACGAAGA
TGAGTACGATGACATAGATGACGATGATGAGCCAATGGACGAAGGCGATG
AGCTAACCACTTGTCTGTTTTGCACCGAAACATCTGCAAACATCTCGGTG
GCCATTGACCATCTTGACGCCCGGCATAAAGTGAATCTGTCCCAGCTTCA
GCGTAAATTCGAAATGGACCAGTATTCCTTTATCAAACTGATAAACTACA
TAAGAGCCAAAAAGATCAGTGCCGAGCAGTTATTGTCTGCGGAACATCCG
CTTTGGCAGGATGAGAAGTACCTCCAGCCCGGGGAGTATGAGCCCTGGCT
CTGCTATGACTACGAAGTCCTTAAAACAGACGGCGCTCCGACGCAGCCCT
CGGTTCTGGAGCTACAACAGCGGATTGCTGAGCAGTCGCAATTGCTGCAG
CAGGCCAACGAGGACATGGAACGCATGCGCAACGACTACAAGGCGCTGCT
GCAAAAGGTACATGCTGACGGCGAGCCCAAAGGTTCCGACCAGAGCGTAC
CGCGTAACAACGTTTGTCTCGACAACGAATACTTCAAAAGCTACGCCCAC
TTTGGCATTCACCATGAAATGCTCAGCGACAAGGTGCGGACCAGCACCTA
TCGCGCGTCTTTGCTCCAAAACGAGGCCGTTGTTCGGGGCAAGACAGTGT
TGGATGTGGGATGCGGCACGGGAATCCTATCCATCTTCGCCTCCAAAGCG
GGTGCAGCTCGCGTTGTCAGCATAGATAACTCGGACATTGTGTACACCGC
CATGGATATCATCAGGAAGAACAAGGTTGAGAATGTTGAACTGATCAAGG
ACGGCTGGAGGACACAGATCTCCCAGAGACTAAATACGACATTATAATAT
CCGGATGGATGGGCTATTTTTCTTTTTGTACGAATCATGCTGGACAGCAT
TATCTACGGCCGCGAGAATCACTCACCCCATGGCATAATACTGCCAGTCG
CTGTACACTCAGTCTCTTTGGCTATGGAAACGACCGCTTTATGCCGAATG
AGTGAAATTTCTGGTCCTACGCTACAAGGTCGAAATGAGCGATTGCAGGC
AATCATAAGAGCATCTGCATGTGAATGCAGGGACAGTGTCGTGAACGGAA
CTGCAACGAGAATT
FMO02557.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art3-RA | 1740 | CG6563-RA | 143..1283 | 8..1143 | 5235 | 97.9 | Plus |
| Art3-RB | 1804 | CG6563-RB | 229..1347 | 30..1143 | 5125 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15228108..15229180 | 1097..30 | 4890 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:45 has no hits.
FMO02557.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:25 Download gff for
FMO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6563-RA | 167..1288 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:56 Download gff for
FMO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 136..1257 | 1..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:05 Download gff for
FMO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 136..1257 | 1..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:05 Download gff for
FMO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15228077..15229179 | 31..1128 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:56 Download gff for
FMO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11053799..11054901 | 31..1128 | 97 | <- | Minus |
