FMO02558.5prime Sequence
1198 bp (1047 high quality bases) assembled on 2008-05-23
> FMO02558.5prime
CAGTCGACATGGAAGGCGACGCGGAAAATCGCAAGGATCAAATCCTCGAG
CGTTTGAACAAAAGAAACAAGGACAGGCAAAACTATTTGGATGTGAAATC
GGAGCTGCGTTCCAAGGAAACAGTGCAGAACGAGGGCGTTGACTACTTCT
ACCAGACTTTCAGCCAAAAAACCATGGATATAGAGCAGCGATTAAAGGAT
GTGCAGTGCGGCGATGGCCAGCCAACCGATTTGGCCAGAAACTTCGCCGA
CATAACTGTGGAGATCCAGGATCTGCAGCGATATCTCACCGCATCCACCA
TGTTTCTGCCCGACTTCAAGATCAAATCCTGTCAGAATATCCTTAACACC
CTGACCGCCGTCAGTGATGAAACCCGCCAGCGCCTGTTGCCCAAGAAAAA
GTTTGGTTTCAGTGGCAAAAAGACCGTCACAAAGCCAAAAGTCCCTCCAA
ATAAGGATATAGTCGACGCGAAACTCAGTAAAGTCCCAGAAAAACTAGGC
TCCAATTTCACGTGGACGATTGCCAATCGAACGAACGAGCATATAGTCCT
GGATTCCGCTAAAGTCAATGGCCAGGACATCACAATATCGAAACTGAACC
ACTGTTTGGTTGAACTGCAGGGTCATCCCGGTTCTGTGCAGGTTTCCAGG
GCCTCCAAATGCACGCTGCTATGCGGCCCCATCGCACGCTCCTTCTTCGC
CGAGAATCTCGAGGATTGCACCCTCTCCATTGCCTGCCAGCAGTTGAGGT
TGCACTCCTCCCGGTCCATTCGCATATACATGCATGTCACCTGCCGCGCA
ATAATCGAGGATTGCAAGAGTATTGAGATCGGAGAGTACAACTACGATTA
TTCCAAACTGGAGGCCGACTACCTAGCTTCTGGACTGAATAAGGCACAGA
ACAACTATACGGATGTGGCCGATTTTAACTGGCTTTCGCCGGATGTCCCT
CGCGAACTGGAGCCTCCTCAGATTATCCGATCCGATTGGAACGCCTTAGG
CGCGACTTATTGCCATACCATACAGCGAACTTAAGCAGGATGTCAAGGAC
TTTCATCATGGCAGCTTTCTGACATCGTTTGGCGCCGGGCCAGGTTAATG
GTCATATCATAATCAATCTAATCTATCCACTAGCCTAGAGATCTGGCCAT
AACTGGGTCTGAAATCCTCACACAAATTAAAAAGCTCGCGGGCGGCCA
FMO02558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31961-RB | 1477 | CG31961-RB | 243..1296 | 8..1050 | 5005 | 99 | Plus |
| CG31961-RA | 1333 | CG31961-RA | 99..1152 | 8..1050 | 5005 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4186431..4187484 | 1050..8 | 4775 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:38 has no hits.
FMO02558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:09 Download gff for
FMO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 95..1159 | 8..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:53 Download gff for
FMO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 99..1163 | 8..1059 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:02 Download gff for
FMO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 99..1163 | 8..1059 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:02 Download gff for
FMO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4186423..4187484 | 8..1055 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:53 Download gff for
FMO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4186423..4187484 | 8..1055 | 98 | | Minus |
