FMO02561.5prime Sequence
1231 bp (1022 high quality bases) assembled on 2008-05-23
> FMO02561.5prime
CAGTCGACATGAGCACGGGCATTGGCAGCAGCAGCAGCAGCACGGAGGAG
CAGCAGCACCTGGAACTGAGCGCGGACTTGGAGGCGTGCTCCCTGCTTGG
CCCGCAGGACCCGTCGAACGTCGATACCGGCAGGACACGCGCTAAGCAGC
GACTCAGCTTGAACGGAAAGCGGCGCCGCAGCCGGATGTCGCGCAGGGCC
AATCTGATCGGCATCTGCGGCGTGAGCAGCCTGTGCATCCTGCTGCTGAT
CGCCACCACCCAGCACCGTCCGCTGACCACGCCGTTTAATCAGTCGGCTG
GGCGGGATCAGGGCGCGTCCGTAGATGGCGGTCCATCCAATTCGCTGGCG
CGCAGCGCCTTCTACGATCGCTTCCAGCAGCAATTGCAGCAGCAGCAGCA
GTCGTCGCAGACGGCCGTCTACAATCTGACAGCTACTATAGTGGATGTCC
TGTCGGCTCAACGGTCGCGCATCCTGGCCGAAATGGAGAACTTCGAGTAT
CCGCGCGGCGGCGCCGAGCGTCTGACGGACATGACGCCGGAGACGAACGG
CACCCCGGTGCGCAGTGTGGTGGTCACCTCATGGCGCTCCGGCTCCACCT
TCCTGGGTGACATTCTCAACTCGATACCGGGCAACTTCTATCACTATGAG
CCGCTGCTCGACTTCGGCATCAAGCAGATCCGCGATCCTGACGATCAGGA
GCTGGCCGTGCAGAACCTGAAGAACCTGCTCAACTGCGACTACGCCGACA
TGATCGACTATCTGAACTTCGGCAAGACGCACACCTATCTGTTCGAGCAC
AACACCCGACTGTGGGACGTCTGCCGGGAGTTCCCGCGCTTCTGCTGGCG
TCCAGCCTTCCTCACGCGCTTCTGCCGCCTCTTCCCCATCCAGAGAATGA
AAGACCGTCCGCCTGCGACTCGCCCAAGACGAAAAGCTGCTCGAGGAACC
AAAGTCTTTCCAGCGTGCGATCGTGCTGCTGTGCGAGATCAACGAGGTAC
GATGCAATCGAGCCGAACATCGAAGTGTGGTGCCGAAGCAACGAAGACTG
CAAGAATCCACGAACTGGTGTGCAAGGATCTGCGGAATGACTACAAGAAC
ACGGAAGGGGCCGTGCTGAAATATCCGTCTCGTTAAGAACTGTTCGTTAT
AGAAGAAACCTTCCTGATCCAAGGAAAAAGAACAAGGACATCTCGACATC
TATAGGCTGTGCTCCTGTAGTCTCTGCGTCT
FMO02561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31637-RB | 2595 | CG31637-RB | 230..1369 | 9..1150 | 5165 | 97.4 | Plus |
| CG31637-RA | 2672 | CG31637-RA | 230..1369 | 9..1150 | 5165 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6498876..6499813 | 9..947 | 4600 | 99.6 | Plus |
| 2L | 23513712 | 2L | 6525366..6525546 | 953..1134 | 370 | 86.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:51 has no hits.
FMO02561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:11 Download gff for
FMO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 228..1232 | 1..1006 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:00 Download gff for
FMO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..1227 | 1..1006 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:08 Download gff for
FMO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..1227 | 1..1006 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:08 Download gff for
FMO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6498869..6499819 | 1..954 | 99 | -> | Plus |
| 2L | 6525368..6525421 | 955..1006 | 92 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:00 Download gff for
FMO02561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6498869..6499819 | 1..954 | 99 | -> | Plus |
| arm_2L | 6525368..6525421 | 955..1006 | 92 | == | Plus |
