FMO02564.5prime Sequence
1194 bp (1047 high quality bases) assembled on 2008-05-23
> FMO02564.5prime
CAGTCGACATGGAAGAATACGAAGCACAATTGCTCGTTGTGGAGCAGGCA
TTGGAAAATGCCGCGGATGATGCGCAACGCCAGGATCTTTTGGCCCTAAA
GAACAATCTGCAGGAGCTGTTGGCCCTCACCCGGGAATCAGGAGATGAAG
CACCAATCGATGAACTACCTCAGCAGGGCGACAATCTGGATGATGAGCTG
CAGCGGCTCAAAAGCGAACTTAATGACCTAGAGGCGGCCGGCTCCTCACA
AACCGCGTTGGATGAAGAACGCCAGCTGGCTGACTTGCGAACCAAGTACA
CCGCCATGGTGGGCGAGAAGTGCTCCGCACCACACGAGCACAGTTGGGGC
ACCTGCTACCACAATGCCCTCATCTGCGGAGTGGACGACGAGGTGGTTAT
GAACAGCGAAGGCGTCTTGGATGCTCGACTAAGGGTTCTCTTTACGAATC
CCACGCATCGAGAAATGCTGCCCTGTTCGTATTACCTCGAAGGCGAGTGC
CGCTTTGATGAGGCCAAGTGTCGCTTTTCCCATGGCGCCCTTGTCACCGG
TAGCTCCATTAGAAAATATAATCCACCCGATTTCCACAAACTCTCCCGCA
GTCGTCCAGTTTTTGCCCTGCTACCAGATCGATTGTGGCATCGAGGTCGT
GTCCTTTGTGTAAATTTCGTAGAGCAGATATGCCGCGTCCGCTTGGATGG
GCAGGATCACAAGGAGCGGGAACGAGACTTCAAGTTCGAAGAACTGTATC
CACTTACCACCGATCAGGATGAGGATGACGAGCTCTCCAGCGAGGAGAGC
AACTCCAGCATGAACGACAACAGCAGTGACGAGGCGGAGTCGGATATGGA
TGATCTGGAGGAAGCTAGAAGAGCACGCATGGTCGAGTTGAGTTTGTTTA
CCTTTAAGCCGACGGAACGACTTGCGCCTGGGAGAGTTCACACGGGGCAT
CGGCTCTAAGCTTATGGAGAAATGGGTTACATCCATGGTACTGGTCTGGC
TCAGATGGAGGGATCGTCCCCCCGGTAAGCGCCCAGATACTCCCCAGGGT
CGATTCTCTAGATGCTGCATGGAGCTGCTGAGCCGCCACCGGGACAAGGA
TTATTTAGCGTGACGAAGCTAAAGCCGCCCAGGCCACGGAAGGCTGATGA
AGCCTCACGTCGTGATCCAACGTGGGAGGTCCTTTCAATCTCTT
FMO02564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4709-RB | 1731 | CG4709-RB | 190..1329 | 9..1132 | 5245 | 98.2 | Plus |
| CG4709-RA | 1602 | CG4709-RA | 61..1200 | 9..1132 | 5245 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9954592..9955514 | 26..946 | 4500 | 99.7 | Plus |
| 2L | 23513712 | 2L | 9955573..9955712 | 945..1078 | 345 | 92.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:23:36 has no hits.
FMO02564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:34 Download gff for
FMO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-RA | 66..1205 | 9..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:30:53 Download gff for
FMO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-RA | 61..1200 | 9..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:17 Download gff for
FMO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-RA | 61..1200 | 9..1132 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:17 Download gff for
FMO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9954514..9954534 | 9..29 | 100 | -> | Plus |
| 2L | 9954596..9955513 | 30..945 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:30:53 Download gff for
FMO02564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9954514..9954534 | 9..29 | 100 | -> | Plus |
| arm_2L | 9954596..9955513 | 30..945 | 99 | -> | Plus |
