FMO02567.5prime Sequence
1237 bp (1022 high quality bases) assembled on 2008-05-23
> FMO02567.5prime
CAGTCGACATGGCTCGGAAACGAAAGATTCCCGTGCGCAAGCACCACGGC
GTCCGTGATCCCCTCAAGCAGCTGGAACAGAAGGAGAAGAAACTTTCCAA
AGTAACGAACAATCCGCCTGTGAAAAAGGATGAGCAGCAGGTGTCCTTTA
AGTTCCGTCAGTTTCAGCAGCTTGCCAACGCCACCAAATCGGGCAAGAAG
CTAAGATTGGGCGAAATTGGACGGGAGGATAAGCCCAAATCCTCTCCAGG
ATCCAAGCCTGGCAGTAGTTCCTCCTCAAAGGAAACGCGTAACATCAAGC
AGTTCGCCAACGAAACGGACGAGGATTATCTGCGCCGAGTGAATCGCATG
ACCAATGCATCCGTACGGGAAGCCCACTACGAGGCCAAGTATGGTGTGAA
CGTGATCAGAAACCCCAAAACCGGGGAGATTACTGTCCAAAAGAGGCCGA
AAAACGAGATCGACGAGCTGCTCAAGCAGAAGCAAAAGGAGCAACGGCTG
GCGGGCAAAAGGGGTCGCAAAAAGGTTCAAGTCGTACACAAGCCCATGGA
TGCGAAGACCAGTCGCGAATTGGTGAAGAGGGCCTACAAGGAGGCCCAGC
AAGAGGTTGATACCGAGGAGAAGCAGAATGCCGGGCCAACAGAATTCAAA
CAGGATGCTGTGGCATTTGGTGAGATCGTCCATGCCCCACCTTCCCTCAA
AATCCTGCCGCGCAAAGCGGAAAAAAGTGAAACCGTGCCGCGTCCAGGAC
GCAAAGCCAATCTCCTTCTAAAGTCCATGCTGAATCCCGACCAGGGTCAG
TCAAATCGTGGGCCGGAGGACGACGACAGCAGTCGACTAAAGCTGGCTGC
CCAATCTAAGAGCGCCTTCAAAGCACCCACCAAGGCCCAGATGAGGGCAA
GCGGAAAGATCTGCCCTTGGCTACGAGGTCAATGCTTGAAACCGGGGCGC
AGCAAATGGTTCAGCTATACCGTCAGCCTCAAAAACAAGACAACAGCAGA
ATCCGCAAGCTTTCTAGAACATTCGGTTGGCGGCGGGGGGCCCAGGTTAG
TGGTTCAATAATCATAAATCATAATCATATCATAATCCAACTAGGCTAAG
GAGAAATCTGGTCAAGAACTAGGTGCTGGAATCTCAACAATAAAAAAGGC
CGGGCCACGAGCGTTCTGAACAATTCGGAGTGGGAAGTTCTGTGAGGTCA
TATATACTGGAAGTCATATACTACACACCGGGGAGAG
FMO02567.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8326-RA | 1260 | CG8326-RA | 70..1065 | 9..1004 | 4860 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17628359..17629271 | 1004..92 | 4345 | 99.3 | Minus |
| X | 23542271 | X | 17629341..17629423 | 91..9 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:28 has no hits.
FMO02567.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:40 Download gff for
FMO02567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 54..1052 | 9..1008 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:13 Download gff for
FMO02567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 70..1068 | 9..1008 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:11 Download gff for
FMO02567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8326-RA | 70..1068 | 9..1008 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:11 Download gff for
FMO02567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17628363..17629271 | 92..1000 | 99 | <- | Minus |
| X | 17629341..17629423 | 9..91 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:13 Download gff for
FMO02567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17522396..17523304 | 92..1000 | 99 | <- | Minus |
| arm_X | 17523374..17523456 | 9..91 | 100 | | Minus |
