FMO02570.5prime Sequence
1190 bp (1019 high quality bases) assembled on 2008-05-23
> FMO02570.5prime
CAGTCGACATGGGAACCGAGGAGGAGCTGATGTTCCGCAACTTCCAGCGC
CTGAAAAGCTACATCTTCGACGACGAGAAGGTGTCCACCACCACATCCCG
CGAGCAACAAAAGACGGAGAGTTCGGTGGAGAAATGCTTCGACCGCTTCG
AGCAGATAATGTTCACCGACCCGCGCCTCACCCAGATCTTCCGGCTGGAG
CACCAGTACTACCTGGACGCGATGCTGAGGCGGCTGCCGTCCAATTACGA
GTGCCTGGACAGCAGTCGCGCGTGGTGCGTTTACTGGATCCTGCAGGCGG
CCCAGCTACTTAGCTTTAACTTCGACGACCAGACATTGAACCACGTGGTC
CAGTTTCTAAGCAACTGCCGTTCGCCGACTGGGGGTTTTGGAGGAGGACC
TGGACAGTATGCCCATCTGGCGCCCACCTATGCAGCAGTGAACAGTCTGT
GCATCATCGGAAGCGAGCAGGCGTACCGTGCCATAGACCGACCGACTTTG
GTCCAGTTCCTGTTCAGTGTACGTGACTCAGACGGCTCCTTCCGGCTCCA
CGTGGATGGTGAGACGGATGTGCGTGGCGCCTACTGCGCAATCTCCTGCG
CAAAGCTGCTAAATCTTCCCGAGCCAGTGATCAAGGAGCTATTTGCCGGC
ACTGGCGACTGGATAGCCCAGTGTCAGACATACGAGGGAGGATTTGGAGG
AGCCCCTGGTCTGGAGGCCCATGGTGGCTACACCTTCTGCGGAATCGCGG
GCCTGGCGCTGCTCAACGAGGCTGATAAGTGCGACAGGCAGCTTTGCTCA
ATGGACACTGCGCCGTCAGATGACCTACGAAGCGGCTTCCAAGGAGGACC
AACAAACTGGTTGATGGCTGCTACTCCTTCTGGGTGGAGCCACCATTCCA
TTACGCAGCACGCTATCCGGCGTCGATAGCAAATGAGCACACCCTTTTCG
ATGTGAGCCCTGCAGAGTACATCCTGCTCTGCTGCAAAGCAGAGCGGCGG
CTTATCGACAACCCGGAAACCGCAGATCTCTACCAACATGCTATACTCTT
ATGGCGTTTCATGCCAGCATCGGAGTGCAGCAGCCTCCAGTCTGGCGAAC
CATACAGCTACTGCTACCACCCAATGTCAATCCACAGTCATGCAGCTGCG
AGACCATTCACATTCCAATGTACCGAGTCTTGGAAAACAT
FMO02570.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17565-RA | 1569 | CG17565-RA | 79..1195 | 2..1090 | 4870 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16433557..16434219 | 365..1011 | 2590 | 97.3 | Plus |
| 3R | 32079331 | 3R | 16433234..16433498 | 104..368 | 1295 | 99.2 | Plus |
| 3R | 32079331 | 3R | 16433076..16433181 | 2..107 | 500 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:49 has no hits.
FMO02570.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:26 Download gff for
FMO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17565-RA | 95..1203 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:52 Download gff for
FMO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17565-RA | 78..1186 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:38 Download gff for
FMO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17565-RA | 78..1186 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:38 Download gff for
FMO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16433075..16433181 | 1..107 | 97 | -> | Plus |
| 3R | 16433238..16433494 | 108..364 | 100 | -> | Plus |
| 3R | 16433557..16434228 | 365..1019 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:52 Download gff for
FMO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12258797..12258903 | 1..107 | 97 | -> | Plus |
| arm_3R | 12258960..12259216 | 108..364 | 100 | -> | Plus |
| arm_3R | 12259279..12259950 | 365..1019 | 97 | -> | Plus |
