Clone FMO02576 Report

Search the DGRC for FMO02576

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:25
Well:76
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG4455-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02576.5prime Sequence

404 bp (404 high quality bases) assembled on 2008-05-23

> FMO02576.5prime
CAGTCGACATGTCTCGCAGTTCGTACCTGTTGTGTGTGCTGTTTTTAGGC
GCCAGCTGCTTGGTTTTCAGTGCGAGTGCAGCGCGGAACAATCGAAGGGG
TTACAAGGCCACGGAACCGCCCACCACCACCCAGCCCCCGCAGACGGCCA
AGGAGTATCTGGATAGTCGACCCGGAATCTCCACATTCGGCATCATCGCC
ATCATCTTCACCGTAATCGTTCTCTGCCTCGTCTTCTACTACGGCATCAT
TTGCTACCCCTTACTCTGTCGCGATGACAAGAAATATCGGTTTATGGACG
TATCTTCAACCATTACTGCCGCCACATCGCGCTCCATTCAATCCATAGAG
AACTATCCCGACCAGAAACACCATCATACGTTGGCCGCAAGCTTTCTAGA
CCAT

FMO02576.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG4455-RA 1528 CG4455-RA 162..539 9..386 1890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16353211..16353550 47..386 1700 100 Plus
2L 23513712 2L 16353095..16353135 9..49 205 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:13:07 has no hits.

FMO02576.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:48 Download gff for FMO02576.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4455-RA 160..537 9..386 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:53 Download gff for FMO02576.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4455-RA 162..539 9..386 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:23 Download gff for FMO02576.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4455-RA 162..539 9..386 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:23 Download gff for FMO02576.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16353095..16353134 9..48 100 -> Plus
2L 16353213..16353550 49..386 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:53 Download gff for FMO02576.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16353095..16353134 9..48 100 -> Plus
arm_2L 16353213..16353550 49..386 100   Plus