FMO02577.5prime Sequence
1118 bp (780 high quality bases) assembled on 2008-05-23
> FMO02577.5prime
CAGTCGACATGTCCAAGTCAAGCGCAGCACGCTGGGTAAAATTCTTCAAT
GCGGCCGGCATCCCATCTCCTGCGGCTGCCGGCTATGCCCACGTCTTCGT
GGAGAACCGCATCCAGGACGACATGCTGTTGGATCTTAACAAGGAGTATC
TCCGGGAAATGGGCATAACCTTGATGGGCGATATAATCGCCATCCTGCGG
CACTCAAAGACCGTCTGCGAACAGAATGCCCGGGAACAGGTCCTCACAAC
GGAGGTGGTTCAATCAGTTGTCCGACCGGTATCGCCAAAACCCAAAGCGC
CGGTTGCAACTCCAAAAGCAAAGGTTTATCCGCCTGCGAAACCTGCAAGA
CGGGTGCTTCCGGAGCACGAGGGCAAGTACAAGGTGACACTGCCCTCGGG
AACCACCGAGCGCAGCAAACAGATCTTAGCCAAGCGGGAAAAATTATACT
CCGATCGTGTGAGCAGCTCCAAAAAGTCGGACATATTTACGCGCCTGCAT
GCCGAGGACGAGGCGCAGGAGGGCATTGTCTCCAGTTCGGGCGAGAGCAG
CGTCCGCGTGCACGTTGCCGGCGCATCAAAAAACAGCGGCCACCTCCAGC
AATAATTCGGTCTTCGCTCGACTCGGTGGCAAGCAGGGCGCTCTTCCGGA
GGAGTTCACTTCGACCAGGGAAATCAAATCGATCCTTAAAAACACACACC
GTACAGTTGGTGGTGGAGGAGGAGGAGGAGGGGTCACCAAGAACTCGCCA
TTGTGAAAGCGAAGAAGTTGGCCGCTGTAACGCAGCAAAAGGTCATGCTA
GTCCACAAGTTGCTCTTAAAAAAGGCAAACGACAACATGATAGCATGACG
AATCGAAAGTGAACAAAAAGTATTAACTGTCAAGCGAAAAAAATTTGAAA
TGGCGACGGCAAAAGATTGGTAAGTGCCCTCGACAGCGGAAGGTTCGAAT
CGTTCGTAATCGCGCATACAAAAAATAGGCAGGCCAAGTTTGCGAAATAA
ATAATCAAGGTCTGGAATGGTATCAACTTCTGCAGAAAAAAAATTAACAC
TTAAGGGCTCGTGAAGAAAACCAGGGCTCGCTACTACTCTACTCTGTTAA
GCAATACATTCACTGTCG
FMO02577.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16812-RA | 1721 | CG16812-RA | 143..1170 | 9..1024 | 4160 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13222869..13223288 | 25..444 | 2100 | 100 | Plus |
| 2L | 23513712 | 2L | 13223345..13223727 | 445..826 | 1710 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:01 has no hits.
FMO02577.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:50 Download gff for
FMO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 163..993 | 1..833 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:39 Download gff for
FMO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 137..967 | 1..833 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:08 Download gff for
FMO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16812-RA | 137..967 | 1..833 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:08 Download gff for
FMO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13222872..13223288 | 28..444 | 100 | -> | Plus |
| 2L | 13223345..13223733 | 445..833 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:39 Download gff for
FMO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13222872..13223288 | 28..444 | 100 | -> | Plus |
| arm_2L | 13223345..13223733 | 445..833 | 97 | == | Plus |
