FMO02578.5prime Sequence
1229 bp (1029 high quality bases) assembled on 2008-05-23
> FMO02578.5prime
CAGTCGACATGGACATCACCCAGAGCTTCAAGGCCAGCGTAATGACGGTG
CGCCTGCAGCGCAAGGCCGAGCTGGCCGGAAAGGCCAAGCCCGCCACAGT
GCCGACAAAAACTGGACCAATTGGCCCAAAGGATGACTTCGCCAAGCAGG
CCAAGGAGGTGTGCAACAAGATCACTTCGCTGCGCAATGTGCTGATCGAG
AACCGCACCGCCTACATGCGCATTGGCCAGCACCTCAAGTCCGCCGCACA
CATGACCGACGCGCAGCGGGATCTGATTGATCGCGAGTCGGAGAAGTTCG
TCACCTTTTACACGCAGCACCTGGCCAAGATGCGCAGCGATTGGAAGAGC
GCCAAGCGGAAGCCGCAGGAGCGTCAGCACATCGACGCCGTGCTGGACCT
GCTGGTCAGCTATTTGCACAGCGTGGAACAGATCTATCTGGACCAAAAGA
AGTACCGTGTGCAACACGAACTGGAAACCTATAGGCTGCTCAAGCTGGCG
GCGGACAAAAAGAAGATACCAGTGCGTCCGGCGGGCAGCAACAGTGGCAA
GCTGGGCAGGCGCCAGGTCAGCAACGATGACAGCGAAGCCACGAAGTCAT
CTTCACAAGCAAATGGCAACCACGACGAGTCCGCCGACAATGACTGGAAT
AACGACGCCTGGGGCGACTGGGATGAAGACGAGGAAGGCGACGAGGTGGA
CGATCACGATGGCGAGAAGGGCAAGGAAGCCAATCACGCCAATCAACACA
AACCGCGTACGCGCAACGAAGCAAAGCCAACAGATCGGATCTGAACAACT
CATCCTCCAAGATGGCTCTGGATGAGGAGCTCCAGCAGCAGCAGGAGGCC
GACGATGACGATCCCCTAAGCGCCGAGGATGTGCAGCTCTTCGAGGCGGA
GAACGTACACATCTACAACTTTCTGCAGGCGTCTCCGAGGAGGTGGAGCA
GATCGAAAAGAACGTGGTAGACATGCTCAACTGCAGACATTTTCACCGGA
AAAGGTCGCATGCACAGCACAATATCGAACAGGAAAGTAGGTGCCGTCTG
GGCACCACGGAACGTCAAGACGCCAACGAGCAAATTCGCAGCACTCCACG
AATGCAGGAACTACGCGGTGGTCCTGTTCTTCTGGCTGGCTAGTGCATCT
TCCTGTCTCTGGACTGAACTAATAGTGAGCAAGCTTCAGAAACAATCGTT
TGGCCGCGGCCAGGTAGAGGTGCCATATC
FMO02578.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx18-RA | 1442 | CG13626-RA | 90..1233 | 9..1139 | 5145 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24624476..24625473 | 1002..9 | 4745 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:23:45 has no hits.
FMO02578.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:51 Download gff for
FMO02578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13626-RA | 108..1212 | 9..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:01 Download gff for
FMO02578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx18-RA | 90..1194 | 9..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:21 Download gff for
FMO02578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx18-RA | 90..1194 | 9..1102 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:21 Download gff for
FMO02578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24624475..24625473 | 9..1004 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:01 Download gff for
FMO02578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20450197..20451195 | 9..1004 | 99 | | Minus |
