Clone FMO02583 Report

Search the DGRC for FMO02583

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:25
Well:83
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6144-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02583.5prime Sequence

710 bp (259 high quality bases) assembled on 2008-05-23

> FMO02583.5prime
CAATCCACATGGATTTCACGGGCTTTGAAGTGCGAAAGTGCCCACCGACT
GTCATGTACATTCCGAACTTCATCACTTCCGAGGAGGAGCATCGCATCCT
GATCCACATCGAGCGCACTCCGAAGCCTCAATGGACGCAGCTGCTGAACC
GCCGGCTGGTCAACTACGGCGGTGTGCCGCATCCCAACGGAATGATTGCC
GAGGAGATTCCGGAGTGGCTGCAGACCTATGTGGACAAGGTCAACGATCT
GGGGGTGTTCGAGTCGCATAACGCTAACCATGTTTTGGTCAACGAGTATC
TGCCGGGTCAGGGAATTCTGCCGCACACCGATGGACCACTGTTCCATCCC
ATCATCTCCACCATTTCCACGGGTGCTCATACCGTGCTGGAGTTTGTCAA
GCGTGAGGACACCACAACTGAAACAGAAGCTGGAGATCAGACGACCCGTG
AAGTGCTCTTCAAGCTGCTGCTGGAACCGCGCAGCCTGCTCATCCTCAAG
GACACGCTGTACACCGACTATCTGCACGCCATCTCCGAGACTAGCGAGGA
TGTGCTCTGCGATCGCATCTCCGACTACGATCTGTGCGAGAATACCTACA
AGATCGGGGATCACTTACTACGCCGATCGCCGCGCATCTCCCTCACCATC
CGTAATGTGCCCAAGACCAGCAAGATGAAGCTCAAGTTCTGCGCACGCTT
TCTAGACCAT

FMO02583.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG6144-RC 1553 CG6144-RC 113..797 8..692 3305 98.8 Plus
CG6144-RB 1705 CG6144-RB 265..949 8..692 3305 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10489050..10489705 37..692 3160 98.8 Plus
Blast to na_te.dros performed on 2014-11-28 22:23:14 has no hits.

FMO02583.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:54 Download gff for FMO02583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 214..904 8..700 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:02 Download gff for FMO02583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 8..700 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:42 Download gff for FMO02583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6144-RB 265..955 8..700 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:42 Download gff for FMO02583.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10488958..10488988 8..38 100 -> Plus
2L 10489052..10489711 39..700 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:02 Download gff for FMO02583.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10488958..10488988 8..38 100 -> Plus
arm_2L 10489052..10489711 39..700 98   Plus