FMO02586.5prime Sequence
1198 bp (1012 high quality bases) assembled on 2008-05-23
> FMO02586.5prime
CAGTCGACATGGCAAACAGCTCCAGCTCCGACGAAAGCTGCAAGGCCCCC
GACAACTTTCGCATCTCGAGCGCCTCCACAAACGGCGAGGACGAGGAATC
AGATGTCGCAGGATACACAACAAAGCGCAGGCCAACGGCAGCGACGAAGG
AACTGTTGAAGGATGCGAACGCCAAGGATAGGAACGCCACCACGGGAATG
GGTGCCCACATGCGGTGCCCACTGTGCCACAGCTGCAGCGCCAGCCGATT
CCACTGTCGCAATTGCGTCAGAAACGGAAACATTACTCACAGCCAGGCGG
AAAGGCCCGAAAGCCTGACGGAGAAGCAGCAGCGCTACATCAACCTGCAG
GCGGGCCTCAAAACCTTCAGCACGCGCTACGAACGCCTTATCGGGCAGCA
CCGCTCCAATGAAGATCGCCTGATGGCCATCAAGGCCAAGCGAAAGCAAC
TGGAGCTCCTACAGCAACTAATCTCCGGCACGGGACAGAGACTGCGCGTC
CTCGGCGAGCGACGCGATGAATTGCGTCGCGCCAATGCCGAGAAGCGGAA
GAACCTACCTAAATACCCGGACAAGGTCAAGATGCTCGAAAACTACGTGT
TGGATCGAGTGGAGAAAATAGAGAAACTCAGGGAGACCCATCTGGGTCTT
CTGGACAGCATAAAACAGGCGGCGCGTCGCAGCATTCAGCAACTGGTCAC
CTATGTGTTTCCCATAGCTGAGGTGGTCCTCAAGGAGGAGCAACAGAGGC
GGGCTAGTGTGGAGCGCACCGAGGAGGCGGAAACCATAGCGGCGCTGGCC
GATGCCAAGAATACATCTTACATACGCGGCAAATGGGTTTTTCATGGCAG
TGGATCAGTGAAGTTCAATACAGGATTGTGGGCCCTTCGTTGCCAGCCAA
TGGCGACTATACCGCCTACCTGGACTGGCTGGCGAAACAAGACGACGTTC
CCAAGCCACGGCACGAGATTACGCGAGCAGTTCGAAGCCTATCGCATGTG
GCGCCTCTTACCTACACGCGCAGCTGACGCAGTGCTCAGCTTCTACCTGA
ACGTGCGCTGCCACATAAGAATCGCTATGCGGACCTCCTGTCGTAAGCTG
CTCACGAAGAACGGTTCCGGGCCAAATTCCGCCTCACTTCAATCTAGTAA
TCTTGCTACACCAGACAGGTGAATTTGCCTGTCCTCTCTGAACAGTCA
FMO02586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg14-RA | 1866 | CG11877-RA | 78..1274 | 9..1186 | 5115 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29116843..29117664 | 312..1120 | 3245 | 96.4 | Plus |
| 3R | 32079331 | 3R | 29116468..29116772 | 9..313 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:34 has no hits.
FMO02586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:00 Download gff for
FMO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11877-RA | 76..1213 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:25 Download gff for
FMO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg14-RA | 73..1210 | 1..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:26 Download gff for
FMO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg14-RA | 73..1210 | 1..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:26 Download gff for
FMO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29116463..29116772 | 1..313 | 98 | -> | Plus |
| 3R | 29116845..29117672 | 314..1127 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:25 Download gff for
FMO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24942185..24942494 | 1..313 | 98 | -> | Plus |
| arm_3R | 24942567..24943394 | 314..1127 | 96 | | Plus |
