FMO02590.5prime Sequence
572 bp (572 high quality bases) assembled on 2008-05-23
> FMO02590.5prime
AAAATAGGAAGTTATCAGTCGACATGACTCCCAATATCGAACACCTGCAA
GTGGCGCTCGAGGTGGCCAAGAATACGCGGGAGGCGGTCCTCTGTCTGAC
CAAAGAATGGCTGAGGAATCAAAACCACACCCTGCCCCAAGATCTTCACT
CCTACTCTCTGCATTCCCTGGCATTGAAGCATCCGCTCCAGTCGGAGGTC
AAGGAAGTTAAGTTCCAGAACCAGCTGGGTGACTTTGTGTACAGTGGCAA
GGTGACAACGCTGCAGGAGGAGATGCCGGCCATTATCGAGTCCCTGCTGG
TCCTGGAGCATCTATACGAGATCATTGTGTTCGATCACCAGTCCTGGAAC
TGCTACTTCAATAACTTCGTGCATTTCTTCCATCACAACATGCACGAGGC
TCTCAAGGTCGCCGGTCTCAACGATGCCTGCAATCCGAGGAACGCCGAGT
ACAATGCCGATCACATATGGCCGATGTTTGGCGCCGCCGTGGAGACCATC
AAGGTGCTGACCATCATCGAGCACAAGTACGAGCAGCTGATCAAGCTGTA
TCAGGCAAGCTTTCTAGACCAT
FMO02590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6023-RC | 1453 | CG6023-RC | 554..1084 | 24..554 | 2655 | 100 | Plus |
| CG6023-RA | 1425 | CG6023-RA | 526..1056 | 24..554 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18314493..18314937 | 554..110 | 2225 | 100 | Minus |
| X | 23542271 | X | 18315017..18315103 | 110..24 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:23:21 has no hits.
FMO02590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:05 Download gff for
FMO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6023-RB | 466..999 | 24..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:05 Download gff for
FMO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6023-RA | 498..1031 | 24..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:44 Download gff for
FMO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6023-RA | 526..1059 | 24..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:44 Download gff for
FMO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18314490..18314936 | 111..558 | 99 | <- | Minus |
| X | 18315017..18315103 | 24..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:05 Download gff for
FMO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18208523..18208969 | 111..558 | 99 | <- | Minus |
| arm_X | 18209050..18209136 | 24..110 | 100 | | Minus |
