FMO02591.5prime Sequence
1200 bp (1016 high quality bases) assembled on 2008-05-23
> FMO02591.5prime
CAGTCGACATGAGGCTGCAGCTCTTCTTTTTTCTCGGCCTGAGTGTTCTA
GTCAGTGGAGGAGAATCCTCACACGATGCCGAGAGGCGAATGCATCCGGT
GTTCTCGCTTATGGGAACCGGATCGAATCCAATCGGAGGAGGTCGATACA
AGCGAGCCATGCCCCAGATCGTTTTTGATGCCGTAAGATCAGAGGAGCGG
TACGCCGAGTACTGGCAGGGTTTGGCGGCCCAAACACTGGATCAGCAGCT
GGAGAGTAAGCTGCGATTGAACACCCAGCTGGCCAGGAATGTGATGCTCT
TCATTGGCGACGGCATGTCCATACCGACAATCACGGCGGGTCGCGTTTAC
TTGGGCGGCGAGGAGAAGCAGTTCGCCTTCGAGCAATTCCCGTATGTGGG
TCTCAGCAAGACCTACTGTGCCAATATGCAGGTGGCCGACTCCGCCTGCA
CCGCCACCGCCTATTTGGGTGGTGTCAAGGCCAACTATGGCACGATCGGA
GTAAGTGCAGCGGTGCAGTTCAAGGATTGCCAGGCGCAGGCACAAGCCGC
CCACCATGTCTCCTCCATTGCGGCCTGGGCGCAGAAGCAGGGAATGGCCA
CCGGACTGGTTACCACAACCTCCGTAACACATGCCTCACCAGCTGGAGTG
TACGCCCACCTGGCCAACCGGAACTGGGAGAACGACGCCGAAGTGGTGGG
AGACAATGGTGACCCCGATCTGTGTCCGGACGCAGCTGCCCAGCTGATAA
ACAGTCCGGTGGGTCAGAAACTTAATGTGATAATGGGCGGAGGTCGCGAG
AATTTCCTGCCCAAAGGCGTGACTGATTCCAGTGGAGCGCCTGGTCGCCG
TTTGGATGGCCGCAATCTCATCGACGAGTGGAGACCAGCACACGACAGTG
CTCATATGTGAGAATCGCAGGAGCTGCTCAACCTATCCAATCACACTTCA
CGAGTACTGGGCTGTTTGCCCCTACCACATGGCTACCATCTGGATGCTAG
TCAGCAGAGCAACAACGCTGGAGGAGATGGTTCAGTCGCATGGAAATCTT
GGAGCGCCGAAGTGCCGACGCGGTACCTTCTTTTCTGGAGGGCGTCGGAA
TCGATCATGGTCCCACAACCCTGGCCTTGAGCATCAGGACGCGGATTTCG
ACACGGTGGCATTGGCAGGGATTCACCGCAGAGATACGCGAGGAAATTAT
FMO02591.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8147-RA | 1862 | CG8147-RA | 88..1229 | 9..1131 | 5095 | 97.6 | Plus |
CG3264-RB | 2182 | CG3264-RB | 414..552 | 377..515 | 260 | 80 | Plus |
CG3264-RA | 1737 | CG3264-RA | 414..552 | 377..515 | 260 | 80 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9495002..9496068 | 62..1112 | 4460 | 97.4 | Plus |
3R | 32079331 | 3R | 9494888..9494942 | 9..63 | 275 | 100 | Plus |
2R | 25286936 | 2R | 9562517..9562606 | 407..496 | 225 | 83.3 | Plus |
2R | 25286936 | 2R | 22210152..22210258 | 515..409 | 220 | 80.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:01 has no hits.
FMO02591.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:45:06 Download gff for
FMO02591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8147-RA | 80..1227 | 2..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:40 Download gff for
FMO02591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8147-RA | 82..1229 | 2..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:39 Download gff for
FMO02591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8147-RA | 82..1229 | 2..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:39 Download gff for
FMO02591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9494882..9494942 | 2..63 | 93 | -> | Plus |
3R | 9495004..9496090 | 64..1131 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:40 Download gff for
FMO02591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5320604..5320664 | 2..63 | 93 | -> | Plus |
arm_3R | 5320726..5321812 | 64..1131 | 97 | | Plus |