FMO02592.5prime Sequence
1209 bp (1001 high quality bases) assembled on 2008-05-23
> FMO02592.5prime
CAGTCGACATGTCCACTACCGAGGCGCCGGATGCGCTGGTGGAGCAGGTC
CGCGAGGTGACCGCTTGCTCCATGGACGAGGCCAAATATTACTTGTCTGC
CTGTGCCAACGATGTGTCCGCCGCAGTGGCTCTGTTTTTCGAACAGGCAG
CCTCCACATCCACGCCATCGGGCTCCAGTGCCGGTGCTGCGGCTGAATCG
CTACCCGTTTTGGACGACGAGGATGAGGTAAGGGCGCCAATTGCCCCGGT
CCGTGAGCAATTGATCCTGCCCGAGGACGACAATTTTTTTGCGTCGGGGA
GCAGTAGCCGGCTGTCGCGTGTGACGCAGCGCGTCAAGGTTCATCCCCTG
CGGGACTTTGCCCGCGAGGGCGCTCTAATGGAGGAGCAGCTGCAGGCCAC
TGGCGTCTATGCCGATCCCAATCGAATCCGTCGCGGACGGGCCGCCCAGA
TGGTGGTGGCCGGTCAGGCCATGGCACTTAACAGACGGTCCACAACGGAC
ACGGCAACCAGCACATCCCGCCTCGGAGACCTATTCCGCCCGCCAACGGA
CATACTCTACTCCGGATCACTAACCGCTGCCAGGGAGTTTGCCACCAAGC
GTCAGCGCTGGTTGCTGGTCAACGTGCAGGACGAAAACTTTCAGTCGCAG
ACTTTGAACCGCGATGTCTGGTCGGACAAGGAGCTTAAGAAACTGATACG
TCGCCAGTTCACCTTCTGGCAGGTGGACAACGACACCTCGGAAGGACGCC
GCTTTGTGGCCTTCTACCACTGCGCCACCCTGCCTTACATATGCGTGATC
GATCCCCGTACTGGTGAGGAAGTGTGCCGCAGCGCAGAGCTCGAAGCTGG
AGTATATTTCTTCCCGATTTGAGGCAGTTCTTGAAGGAGCACCGTGACTT
TTATTCAGGAGGATGCACCAGGCACCTCGAAGCGTTCGGGCACGTACATC
GATGATGACGAGGTGCCCGATCGGAGGCCTCGTGCTCTCGACAGCAGTTC
GAAGAATTGCCCAAGAACGTGCCAAGGTTCTGGAGCTTACGTAGAAGAGC
AGCTTGGATTGGGCTATCAGGATTCATAACGAGACGGTGGGTGGCGGGAG
CCAGCAACAAAACGATTGTTCCGAATGGAACCAGCGATATATGAAAGCTT
GAGGATTTCATGTATATGAGAGAGCTAGGGTTGTGCCGCGCGCCCTCCTT
TTCGGGAGA
FMO02592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8892-RD | 1952 | CG8892-RD | 314..1475 | 8..1159 | 5000 | 96.3 | Plus |
| CG8892-RE | 2075 | CG8892-RE | 413..1574 | 8..1159 | 5000 | 96.3 | Plus |
| CG8892-RB | 1775 | CG8892-RB | 137..1298 | 8..1159 | 5000 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4980124..4981175 | 1056..8 | 4720 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:10 has no hits.
FMO02592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:23 Download gff for
FMO02592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RC | 335..1392 | 1..1056 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:53 Download gff for
FMO02592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RB | 131..1188 | 1..1056 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:07 Download gff for
FMO02592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8892-RB | 131..1188 | 1..1056 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:07 Download gff for
FMO02592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4980128..4981181 | 1..1051 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:53 Download gff for
FMO02592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4980128..4981181 | 1..1051 | 98 | | Minus |
