FMO02594.5prime Sequence
1190 bp (1020 high quality bases) assembled on 2008-05-23
> FMO02594.5prime
CAGTCGACATGGAGACACCCATGGCCGATGACCTGTTGCAGTTCCGCGAC
TACAGCGGCGGTGCCCCGGCCCAAATCAATGTCAATTCCCCTACGCACGG
CGGATCGGGTGGTTCTGGTGGTGGCTCTGCTGGTTCCGGCGGCTCCGTTG
GCGGTGGTGGTGCCAACGCACAGCGTCAACGCGGCGATCCGCTGGCGGAT
CTCATCTATGACATGACCTCCTCGGCCCAGGGATTCTCCGGAGCTGCATC
CTCGGGCGGCTCCCAGCCGCAGAACTCATCGCTGGACGGATCCGCCGGCG
GTGGAGGCGGTGGTGCGAAACTATCACTGTTTACGATCGAGTACTACCAG
CAGTTCTTCAACGTGGACACCTATATGGTGCTCGAGCGAATCGCCAACTC
CATGATACCCAAACGGGCCTCTGGCAACTATCTGCGCATGAACATCGGCG
AGAATCCGGATCTATATGGACCCTTCTGGATAACCGTCACCCTGATCTTT
TCCATAGCAATAAGTGGTAATATTGCCAGCTATTTGCAGCAAGCCACTGA
TGCGTACAAATGGCACTACAACTTCCATCTGGTCTCCTATGCGGCTACGT
CCATCTTCTTGTATGCCAATATCTTGCCAGCCGTTCTGTGGGCCCTCTTC
AAGTACAGCCTGAAGCCTGTGGACTCCGCTGATGCCGTGGAAACGGACAG
CGCCAGCTACATGCCGAGCCTCTTGTCGCTGATGTGCATCTATGGATACA
GTTTGGCCATTTATATACCAGTCTCCATTCTCTGGGTGATCAATATCTCT
CTGCTGCAGTGGCTCCTGGTGATCACCGCCGCCTTGCTTTCGGGCACGGT
TTTGATTGCGTGCTAACGCCAGCGCTGCGCAACTCGCAATTCTCGCTGTT
CCTCATCGTTGGAATCCTGAGTGCACATGTGTGCTGGCCGCCGGATTTCT
GCTCTATTTCTTCACATTCCCACAGTCCCGTCGCTGGATCCAGTGCTCCG
ACACAGCTGCACCTGCTGCTCGCTGCTCTGAAAGCGTGACGCAGGCGTTG
TCACGCAGGCCCGCCATCAGACCCAGCAGGCTTCTAGAACAATTCGTTGG
CCGCGGTCCAGTATGGCATCTCTAACTAACTTAGCTAAATCACTAGCTAG
GAGATCGGGTCATAACAAGTGCTTGGAATCTCTCACCAGT
FMO02594.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4645-RB | 1415 | CG4645-RB | 145..1223 | 9..1075 | 5075 | 98.7 | Plus |
| CG4645-RC | 1588 | CG4645-RC | 145..1223 | 9..1075 | 5075 | 98.7 | Plus |
| CG4645-RA | 1521 | CG4645-RA | 251..1329 | 9..1075 | 5075 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12910203..12910688 | 9..494 | 2430 | 100 | Plus |
| X | 23542271 | X | 12910752..12910960 | 494..702 | 1045 | 100 | Plus |
| X | 23542271 | X | 12911413..12911673 | 795..1047 | 925 | 96.6 | Plus |
| X | 23542271 | X | 12911024..12911116 | 702..794 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:13:23 has no hits.
FMO02594.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:44:57 Download gff for
FMO02594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1334 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:12 Download gff for
FMO02594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1334 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:31 Download gff for
FMO02594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4645-RA | 243..1334 | 1..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:31 Download gff for
FMO02594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12911413..12911710 | 795..1080 | 94 | | Plus |
| X | 12910195..12910688 | 1..494 | 99 | -> | Plus |
| X | 12910753..12910959 | 495..701 | 100 | -> | Plus |
| X | 12911024..12911116 | 702..794 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:12 Download gff for
FMO02594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12804228..12804721 | 1..494 | 99 | -> | Plus |
| arm_X | 12804786..12804992 | 495..701 | 100 | -> | Plus |
| arm_X | 12805057..12805149 | 702..794 | 100 | -> | Plus |
| arm_X | 12805446..12805743 | 795..1080 | 94 | | Plus |
