FMO02602.5prime Sequence
1212 bp (1011 high quality bases) assembled on 2008-05-23
> FMO02602.5prime
CAGTCGACATGTCCGAGCGTCGCGTAGTGCATGAGATACCCGGAGAGTAC
CAGCCAGTGCCCAGAGCACCGGAAGAGCCAACCCCTTTGACCACATCGTG
TTGCCGGCGTCCCAATTGCGGCCTAGGGCTCCAGGATGAGCGAAATATCT
GTTCCTGCAAGCACGGCTACATCATACCAGTGCTTATACTCTTCGTTCTG
GTGATGATTGTGCTTCTGTTGCCTTGGGAGACCTACCATCGAAATGAAAA
CGGAAACAGCCCCGTTCCGGTGGAAAAGCCGTTACCATGTCAACTCGAAC
TGGTGGAGAGCTTGCCCTTGGGGTTGAACTACAGCCAATGGCAAAGCCAC
CCCCAACTGAGTAGCACCTTTGATGCCTGGCAGCTACTACTAGGCAGGGC
CAAGGCATCGTTGGACATCGTTTCTCCGCACTGGACACTGCGCGGCTTGG
ACGTCAACGATAGCAGCACCGGGCCTGGAGATCAACTCTTTCAGCAGCTA
CTGTCGAATGGAGATGCCGGCAGACCCAAGCTGCGCGTGCGGATTGTGGT
TAATCGCAGCCACGATAGCCTGTGGCATGCTGATGCCCGTATCTTGGCTA
ACTACGGAGCAGCCGACGTCGTGGGCATTAATTTTCTGCACTCAAAACTG
TGGTTAGTGGACGGGGAGCACTTCTACTTGGGCACAGCTAGCATGGACTG
GCGATCACTGACGCAACGCAAGGAACTAGGTGTGCTGGCCAGAAATTGTC
CCCATCTTGCTCTAGATCTGGGAAAGATCTTCAAGGCGTATTGGTACCTG
GGCAGCAATGAAGTGCCAAAGAGCTGGCCGTGGATATACCACACGCACAT
CAATCAAAGAAGACCGCTTTTGCTAAACCATCAACAAAAAACATACAATG
AGAGCTTATTTATCCACATCACCACCAGAGTTGATCGCTACTGGACGGAC
CCGAGAGCTAGATGCCATTTAGAGGCTTTCGACAGGCACAGACGTTATTA
CCTCTCCTAATGAGTACTCTCCTCGGCTAGACGGAGTAACAATTGGAGTA
CTGGCCGGTCATAGACCATGACCTGCGGAAGCTGCCTGAACCGCGGGGTG
CCATTAAGGTGCTTAATTCATGTGAGTATTCCGATCCACCAGATCCTCCT
GAGTCCCTCAGGCCTCGACAAATCCGGAAGACATATTCAAAGTGCCGAGC
GCTTTGTGTATA
FMO02602.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43346-RC | 2482 | CG43346-RC | 367..1509 | 8..1137 | 5205 | 97.8 | Plus |
| CG43346-RA | 2250 | CG9243-RB | 135..1277 | 8..1137 | 5205 | 97.8 | Plus |
| CG43345-RC | 2482 | CG43345-RC | 367..1509 | 8..1137 | 5205 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21167091..21168215 | 1122..8 | 4920 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:05 has no hits.
FMO02602.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:09 Download gff for
FMO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9243-RA | 123..1272 | 1..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:59 Download gff for
FMO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43346-RA | 128..1277 | 1..1137 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:46 Download gff for
FMO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43345-RC | 360..1509 | 1..1137 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:46 Download gff for
FMO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21167073..21168220 | 1..1137 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:59 Download gff for
FMO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21167073..21168220 | 1..1137 | 97 | | Minus |
