FMO02607.5prime Sequence
1224 bp (1033 high quality bases) assembled on 2008-05-23
> FMO02607.5prime
CAGTCGACATGCATTCGGCTGGACTACTGATGCTAACCGTGGCTGGATAT
TTCACATCGGGTATTCCTGGCAATACGGCTTCCTCGGACGTCGCCTACCT
GACGCCGGGCACATACATCAATTTGTCGGAGAACATCTTGGGACTGCAGA
CTCTGCGCACGTTCTGCTATCCGGGTAAACGGCTGACGGTGTCAAGTCTC
TTCGAGACTGTGGAGTTCGTCCTGGCCATCGGGAGCGATGATTATTCCCA
GTACGGTGGGAAGACGCCGGAGGAGGTGTTGCAGCACTACAAGGACAAGC
AATCGCTGTTCAGCATCACCCTGTTCGCGCAGAAGCGCCAGCTGCTGCAG
CTCTCGCCCTTCGAGCAGCAGTGCATCGGGATTTCCTCCCGCCAGGCGTA
CACCGTCATTCTGAATAGCATTCCGCTGGATCTGTGGCGTCTCGCACAGT
TCGCCGTCGGCATACTGATCCTCTTCAGCGCCCGGCGGCTAGCAAAGAAC
AGTGTGTTCTACTATCTGGTCGGCATTGTCATCGGCATATGCGCCTCCCT
GCTGGTGGTCATCTATTTGGCCGCCAAACTCTTTCCGCGACGTACCATGA
TGTATGGCGTCCTAATTGGCGGCTGGACCATTGGCTTCTATGTGATCAAA
CAGCTGGCGGACAATCTGCGTTTGATTCTGATCACCTACCGCGACCATGT
GCTGGGCTATCTGGTGATCACCGGACTGATCTCGTTCCTGATCTGCTATC
GCATTGGTCCGCCCAAGAATCCTCGATCGCAACCATCGTCATGTGGGTGC
TGCAGGCCATTGGCGCCGTTATGGCTTACTTCAGCAGCTGGCACACCAGC
GCCGTGATCTTCATCATGGTGCTGGTCTTTGTGGCCACTACTTCCCCATT
TCGTGGACGAACCAGAATCAGTTCATGTATCGCCGCCGTTTTCCGCTAAA
GAGGCGCATGCTCACCCAGGAGGAGTACGATCAGCAGACGGCCGTGGGAG
ACTCGAAATCGCTGGCGGACCTGCGCAAGTACGTCAACAGTCGGATGCAA
GCAGTGGGCGGTGATGGGCCAACTGCGTGATCTTGCCCTTCGCCTCTTCC
GCCAATGAACACGGCATTCTGGGACGACAAAAAGATTCGAGAACCTCCGC
CACATCAGGAGATCCATGGGATTGCGCGCGTCTGAGAGAGATATCCCGGG
TGAGGGACACTGGGTGAGAGGAGA
FMO02607.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9723-RA | 1729 | CG9723-RA | 149..1289 | 9..1145 | 5240 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16654136..16654867 | 740..9 | 3660 | 100 | Minus |
| X | 23542271 | X | 16653696..16654069 | 1107..740 | 1430 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:08 has no hits.
FMO02607.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:17 Download gff for
FMO02607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-RA | 142..1250 | 1..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:23 Download gff for
FMO02607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-RA | 145..1253 | 1..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:43 Download gff for
FMO02607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-RA | 145..1253 | 1..1107 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:43 Download gff for
FMO02607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16653685..16654068 | 741..1117 | 95 | <- | Minus |
| X | 16654136..16654871 | 1..740 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:23 Download gff for
FMO02607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16547718..16548101 | 741..1117 | 95 | <- | Minus |
| arm_X | 16548169..16548904 | 1..740 | 99 | | Minus |
