FMO02610.5prime Sequence
1159 bp (1004 high quality bases) assembled on 2008-05-23
> FMO02610.5prime
ATTATACGAAGTTATCAGTCGACATGTCGGCCAAGCGAAAGGCAGGTGGC
AATGGAGCCGGACCCAACAAGCGGCGACCCAAAAAGAAGGAGTCGGACTA
CGAGGACGAGTTCAGCGACGAGTCCGACGACGATGGCGTGCAGCAGCAGG
CAGCGGCCGCCAACCAGATGGAGGTTCTCATTCCCCACGACGACCTCGAC
CCGCCTAGCAAGCTTCCCGAGGACTTGCTGGCCACGCTAGAGAAGACTCC
AGGTCAGATGCTGATCGCCGGCATGGTGACCTGGGACCTGACTGGCAAGC
GGGACCGCAAGAACGTCACGAAGGTGCGGCCGAATCTGTACAGCTTCCAT
CGGTTCACAGAAGAGAAGTACCGATATGTGGCCAGCGGACCCAGTGCCGC
ACACACCATTCTTATCAACATGGACCGCAAGGCGCTCGGTTTCGGGCGTA
ATCCCAGCGGCCAGCTGGGCCTCAGCCAAGACATCAAGTTGGCGGAGAAG
CCCACCATTATTCCGGCCCTCGAACAGCTGAACATAGTGCAAGCTGCTGT
CGGCCGGCACCACACTCTGTTTCTCACTGACACGGGAACCGTATACGCCT
GCGGCGAAAACAAGTCCGGCCAGTGCGGTGTGGGAAATACGCATGCTAAC
ATTTATTCGCCCACGCCAATTAACTACCGAGGTCCGCCGATCATTCGCAT
CGGTTGCGGAGCTGAGTTCTCTGTTATTCTGGACATTAAAGGTAGCCTGC
ACACATTTGGGCTGCCGGAGTACGGTCAGTTGGGACACAATACTGACGCC
AAGTACTTTGTCAACGCCAACAATTGTCATTCCATTCGAGACGTCGCCCA
AAAGTCGTTTTGTACATAGAGAAGAGCAAGGAGGGTCATGTAACGCCAGT
CGATGGCGTGCAGATAGTTGACTTTGCTTGCGGCAATATCAACACGGTCG
CCATTCGACTCCAGAAGCGCGTTTATAGCTGGGGCTTTGGCGTTCGGGCG
TCTCGACCCCCAGAGCCCAAGGACGAAATGTGCCGCGATTAATGAGTTTT
CGATACTCAGGTCGGGTGGGGCGCAGCGTCTTTGGCGGCTCCACTTCATC
TGAACGTCACAGACTTGACCTTGCTGTTTTTGTTTCGACACGAAATAGAA
GACGTCGAG
FMO02610.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9135-RD | 1871 | CG9135-RD | 184..1326 | 24..1154 | 5030 | 96.9 | Plus |
| CG9135-RC | 2227 | CG9135-RC | 145..1287 | 24..1154 | 5030 | 96.9 | Plus |
| CG9135-RB | 1978 | CG9135-RB | 291..1433 | 24..1154 | 5030 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6052078..6052663 | 367..948 | 2720 | 98.8 | Plus |
| 2L | 23513712 | 2L | 6051678..6052022 | 24..368 | 1725 | 100 | Plus |
| 2L | 23513712 | 2L | 6052738..6052878 | 963..1096 | 320 | 90.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:57 has no hits.
FMO02610.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:03 Download gff for
FMO02610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9135-RB | 296..1443 | 17..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:32 Download gff for
FMO02610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9135-RA | 140..1287 | 17..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:30 Download gff for
FMO02610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9135-RB | 286..1433 | 17..1154 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:30 Download gff for
FMO02610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6051673..6052022 | 17..368 | 98 | -> | Plus |
| 2L | 6052080..6052661 | 369..946 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:32 Download gff for
FMO02610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6051673..6052022 | 17..368 | 98 | -> | Plus |
| arm_2L | 6052080..6052661 | 369..946 | 98 | -> | Plus |
