FMO02612.5prime Sequence
1213 bp (946 high quality bases) assembled on 2008-05-23
> FMO02612.5prime
CAGTCGACATGGCGCGTCTGCGGCTTCTAATCGGTCTTATATTCTGCCTT
GCGATCAGCTTGGATTCGGTGCTTAGTGCCCCAGTGATCAGCCAGATCAG
CAAGGACGTGGTGGCCAGTGTGGGCGACTCTGTGGAGTTCAACTGCACCG
TGGAGGAGGTGGGACAGCTCTCGGTGAGCTGGGCCAAGCGTCCCAGCGAG
TCGGACACCAACTCGGTGGTGCTCTCCATGCGGAATATCCTCAGTCTGCC
CGACCAGCGGTACAACGTAACGGTCACCGAAGGACCCAAGACCGGAAGTG
CCATTTACACCTTCCGCATTCAGAACATCGAAGTCAGTGACATGGGTCCG
TACGAGTGTCAGGTGCTTGTTTCGGCCACGGAGAAGGTGACCAAGAAGCT
GAGCCTGCAGATCAAGACCCCGCCGGTGATTGCGGAGAACACCCCCAAGA
GCACCCTGGTGACAGAGGGACAGAATCTGGAGCTGACCTGCCATGCCAAT
GGCTTTCCCAAGCCTACGATCTCCTGGGCCCGCGAGCATAATGCAGTGAT
GCCTGCCGGTGGCCATTTGCTGGCCGAACCAACTCTCCGGATTCGTTCCG
TGCACCGGATGGATCGCGGCGGCTACTACTGCATCGCGCAGAACGGAGAG
GGCCAGCCGGACAAGAGGTTGATCCGGGTCGAAGTGGAGTTCCGTCCGCA
GATTGCCGTCCAGAGGCCCAAGATCGCCCAAATGGTGTCCCATTTCCGCG
GAGCTGGAGTGCTCCGTGCAGGGCTACCCGGCTCCGACTGTAGTTTGGCA
CAAGAATGGCGTGCCCCTGCAGTCTAGCCGGCACCACGAGGTGGCCAACA
CCGCCTTCTTCTCGGGAACACATCTCTGTGCTGCGCATCGATAGCGTGGG
GCGAGGAGGACTTTGGGGACTACTACTGCATGGCCACAATAAGCTGGGAC
CGCCGGATGGCTCGATCTGCATCTCTTTCAGAACGGTCATCCCCGTGGCC
CTCTTGATCGGCAGCTTTTAGGACAATTTCGTTGGCCGGCCGGGGCCCAG
GTAGTGTGTCTAATTCATAATATAACTAATCTATAATCACACTAGGCCTA
GGAAATTCTGGTCAGGACTATGGTGCGTTGGATTCTCCCAATAAAAGGCC
CGGGCGCACTCGAGGCGGCTTCGGAACACAAATTACTCGAGTAGTGGATC
TCTGCGATGGGGG
FMO02612.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ama-RC | 1526 | CG2198-RC | 102..1096 | 6..1003 | 4600 | 98 | Plus |
Ama-RA | 1542 | CG2198-RA | 118..1112 | 6..1003 | 4600 | 98 | Plus |
Ama-RB | 1833 | CG2198-RB | 409..1403 | 6..1003 | 4600 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6763837..6764782 | 6..950 | 4420 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:05 has no hits.
FMO02612.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:05 Download gff for
FMO02612.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2198-RC | 98..1059 | 1..965 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:46 Download gff for
FMO02612.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ama-RB | 407..1368 | 1..965 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:09 Download gff for
FMO02612.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ama-RB | 407..1368 | 1..965 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:09 Download gff for
FMO02612.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6763830..6764796 | 1..965 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:46 Download gff for
FMO02612.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2589552..2590518 | 1..965 | 98 | == | Plus |