Clone FMO02613 Report

Search the DGRC for FMO02613

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:26
Well:13
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7979-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02613.5prime Sequence

569 bp (402 high quality bases) assembled on 2008-05-23

> FMO02613.5prime
CCCTATAATATACGAAGTTATCAGTCGACATGACTGCCACCAAAAAGCGT
CTGAAGATCGTTGCAGCCATCTCGCTGCACCTCCTGCTCCTGGTCTACCT
TTACCGAATGGCCATCTTCTGCCCAAGCGGAAAGGTCGCCGTTTCCGTTC
CCGGCGTCGAGGAGGTTCAGGCCAAATGGCCGCCCACGGAAAGTCCGCTA
CAAAGGAGCCTTCAGATGGCGTACGAGGAGCAGAGCTCTCTTATTCGAGA
ACAAAAGGCCGAACTCCAGCGCACAAGGGAGAATTTGGCCAGATTGGAGG
AACAAGTTCGTAGCCTCCAGACCAGCACACCGCGCAAGTATCCGAAGGTT
AAATACCTGAACTATAAGAATCGCAAACGCATACTAATTACCGGAGGAGC
TGGCTTCGTGGGCTCCCACTTGGTCCACGATCTGATGGTCCAGGGGCACG
AGGTCATCGTGGTGGACAATTTCTTTACGGGACGCAAGCGAAATGTCGAG
CACTGGCTGGGGCACGAGAACTTCGAGCTCATCCACCACGACATAAGAAT
CCGCTTTTCATCGAGATCG

FMO02613.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG7979-RA 2093 CG7979-RA 119..659 30..569 2620 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8181041..8181581 30..569 2595 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:15 has no hits.

FMO02613.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:25 Download gff for FMO02613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..659 20..569 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:12 Download gff for FMO02613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..659 20..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:53 Download gff for FMO02613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7979-RA 109..659 20..569 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:53 Download gff for FMO02613.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8181031..8181581 20..569 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:12 Download gff for FMO02613.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8174131..8174681 20..569 98   Plus