FMO02618.5prime Sequence
1160 bp (996 high quality bases) assembled on 2008-05-23
> FMO02618.5prime
CAGTCGACATGGCCCAACCCAGTGCCCGTGTGCTCCAAAGCGGCATGCGC
CTGCCTCCAATGCCCACAATTCGGGAGCTGGTGAAGCTATACAGACTACA
GGCCAGGAAACAGCTTAGCCAGAACTTCCTCATGGACGAGCGGCTCACGG
ACAAGATAGTCAAGTCGGCGGGACGCATCGATCCCCGGGATTTAGTTCTT
GAGGTGGGTCCCGGGCCGGGCGGTATCACGCGCTCGATTCTGCGTCGTCA
CCCACAGCGATTGTTGCTTGTGGAGAAGGATCCGCGCTTCGGCGAAACAC
TGCAGTTGCTCAAGGAATGCGCCAGTCCACTAAACATCCAGTTCGACATC
CACTATGATGACATCCTGCGCTTCAACATTGAGCAGCACATCCCGGACAC
CTCACAGCGGATCCATCTGATTGGCAACCTGCCGTTCGCCATATCCACTC
GACTGTTGATCAATTGGCTTGATGATTTGGCCGCCAGGCGTGGTGCTTTC
CGGCGCATCGACACCTGTAAGACTCTTACCTTCCAGCAAGAGGTGGCCGA
GCGAATTTGTGCCCCTGTAGGCGGCGAACAGCGCTGCCGGCTCTCGGTGA
TGTCGCAGGTGTGGACGGAACCCGTCATGAAGTTCACCATACCGGGCAAG
GCGTTCGTTCCGAAACCACAGGTGGATGTGGGCGTCGTCAAGCTAATTCC
CCTAAAGCGCCCTAAGACTCAATTGCCGTTTCACCTAGTTGAGCGCGTAG
TCCGTCACATCTTTAGCATGCGCCAGAAGTACTGTCGCCGAGGCTATGGC
ACCCTGCTTCCTCCAGAAGATCGCGAGGAGGTTGCTGAGAAGCTATTTCA
GCGCGCCGAAGTACAGGACACGCTGCGTCCCTTTGACTACTGTGAGCAGT
GCCTGAGTTGGCGGAGTCTATTCGAGCATCTGTGACGCGACCGAGGTGCT
GCCTATGATACGGCGCCAGATGTAAGTCCTTGCAAGCTTCTAGACATCGT
TGGCGCGCCGGCCCAGTAGTGGTCTATCAAATCTATCTATCATATCACAC
TAGCTAGAAATCTGCTGGACTATGCTGAATTCCACATAAAAGCCGTCGCA
CGACTTCGAATCGATGATTCGAGTCTACGATTACAGGAGTCACGAGGCTG
ATCATATCGG
FMO02618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtTFB1-RA | 1529 | CG42631-RA | 458..1417 | 9..959 | 4560 | 99 | Plus |
| Ccdc56-RA | 1529 | CG42630-RA | 458..1417 | 9..959 | 4560 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11709499..11710376 | 9..886 | 4375 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:30:09 has no hits.
FMO02618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:32 Download gff for
FMO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7319-RE | 422..1410 | 1..974 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:15 Download gff for
FMO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ccdc56-RA | 454..1438 | 1..974 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:25 Download gff for
FMO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ccdc56-RA | 454..1438 | 1..974 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:25 Download gff for
FMO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11709499..11710479 | 9..974 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:15 Download gff for
FMO02618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11702599..11703579 | 9..974 | 98 | == | Plus |
