Clone FMO02626 Report

Search the DGRC for FMO02626

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:26
Well:26
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02626.5prime Sequence

373 bp (373 high quality bases) assembled on 2008-05-23

> FMO02626.5prime
ATAAAAAACCAAGTTATCAGTCGACATGGTCAAGCGGGACAGGACAGGAG
CGAGGAGTGAGGGGATCGAAAGGCGAAGGACCACAGGACGACGTGGCCGG
CTCGGCTCTCTCGCTCGCTCGCTCTGCGAGCCACAAAAAATTCCTTTGAA
TTGCGTCCGTTGCAGCAGGAGCACACAAACACGGCGACATGTATTTTCCG
CATTTTTTGTTGCCTTCTGCCTGTGGCTATGCGCAAAAAAGGACATCTCC
GCCGGCGGTGGCAGGATGACGGTGGTCCACAGGATCGGTGGTTCGTTGGT
TCGGAGGTATTGTGTGTCCTCTATTATGCATTGCGTACGGCCTCGCCCGG
CGTGTGCAAGCTTTCTAGACCAT

FMO02626.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:21:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1479681..1480013 23..355 1665 100 Plus
Blast to na_te.dros performed 2014-11-28 22:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 370..437 59..126 106 61.8 Plus
gypsy5 7369 gypsy5 GYPSY5 7369bp 7309..7365 59..115 105 64.9 Plus

FMO02626.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:59 Download gff for FMO02626.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1479675..1480013 17..355 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:59 Download gff for FMO02626.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1479675..1480013 17..355 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:01 Download gff for FMO02626.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1479675..1480013 17..355 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:01 Download gff for FMO02626.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1479675..1480013 17..355 99   Plus